RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 KRT35Q92764 455 aa17.69■□□□□ 0.42
VARS-215ENST00000375663 SLC5A5Q92911 643 aa17.69■□□□□ 0.42
VARS-215ENST00000375663 ABTB1Q969K4 478 aaPredicted RBP17.69■□□□□ 0.42
VARS-215ENST00000375663 ACSF2Q96CM8 615 aaPredicted RBP17.69■□□□□ 0.42
VARS-215ENST00000375663 NSL1Q96IY1 281 aa17.69■□□□□ 0.42
VARS-215ENST00000375663 AGBL1Q96MI9 1066 aa17.69■□□□□ 0.42
VARS-215ENST00000375663 KPNA7A9QM74 516 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 GEMIN4P57678 1058 aaKnown RBP17.68■□□□□ 0.42
VARS-215ENST00000375663 ANO5Q75V66 913 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 RNF169Q8NCN4 708 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 GGA2Q9UJY4 613 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 MST1RQ04912 1400 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 FAM86B1E9PN63 330 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 FAM86B2P0C5J1 330 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 OSBPP22059 807 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 SLC12A3P55017 1021 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 CIAPIN1Q6FI81 312 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 RNF168Q8IYW5 571 aaPredicted RBP17.68■□□□□ 0.42
VARS-215ENST00000375663 POP1Q99575 1024 aaKnown RBP17.68■□□□□ 0.42
VARS-215ENST00000375663 MOV10L1Q9BXT6 1211 aaKnown RBP17.68■□□□□ 0.42
VARS-215ENST00000375663 DHX35Q9H5Z1 703 aaKnown RBP17.68■□□□□ 0.42
VARS-215ENST00000375663 AGPSO00116 658 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 STX3Q13277 289 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 TAF1BQ53T94 588 aaPredicted RBP17.68■□□□□ 0.42
VARS-215ENST00000375663 ARHGAP18Q8N392 663 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 SPATA18Q8TC71 538 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 KPNA2P52292 529 aaKnown RBP17.68■□□□□ 0.42
VARS-215ENST00000375663 THOC5Q13769 683 aaKnown RBP17.68■□□□□ 0.42
VARS-215ENST00000375663 SIX6OS1Q8N1H7 587 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 SCFD2Q8WU76 684 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 DHX38Q92620 1227 aaKnown RBP17.68■□□□□ 0.42
VARS-215ENST00000375663 HEY2Q9UBP5 337 aa17.68■□□□□ 0.42
VARS-215ENST00000375663 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.68■□□□□ 0.42
VARS-215ENST00000375663 NR3C2P08235 984 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 WEE2P0C1S8 567 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 FECHP22830 423 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 DYNC1I2Q13409 638 aaKnown RBP17.67■□□□□ 0.42
VARS-215ENST00000375663 KCTD19Q17RG1 926 aaPredicted RBP17.67■□□□□ 0.42
VARS-215ENST00000375663 DNAL1Q4LDG9 190 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 ERMARDQ5T6L9 678 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 PDZD8Q8NEN9 1154 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 CCDC68Q9H2F9 335 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 ANKEF1Q9NU02 776 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 H3BRJ5 948 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 PSTPIP1O43586 416 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 SHBGP04278 402 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 GTF2H1P32780 548 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 BIRC2Q13490 618 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 CBWD6Q4V339 395 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 COBLL1Q53SF7 1204 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 CBWD3Q5JTY5 395 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 CBWD5Q5RIA9 395 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 CDKL3Q8IVW4 592 aaPredicted RBP17.67■□□□□ 0.42
VARS-215ENST00000375663 TTLL6Q8N841 843 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 ICA1LQ8NDH6 482 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 FGRP09769 529 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 PDGFRAP16234 1089 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 MYBPC2Q14324 1141 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 GPAT2Q6NUI2 795 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 PPIL6Q8IXY8 311 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 RTKN2Q8IZC4 609 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 ACER1Q8TDN7 264 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 ATXN2LQ8WWM7 1075 aaKnown RBP17.67■□□□□ 0.42
VARS-215ENST00000375663 OLFM3Q96PB7 478 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 WDR35Q9P2L0 1181 aa17.67■□□□□ 0.42
VARS-215ENST00000375663 IGSF9BQ9UPX0 1349 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 M0QZ92 97 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 MUTP22033 750 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 VHLP40337 213 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 DEUP1Q05D60 604 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 TAF12Q16514 161 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 ACAD11Q709F0 780 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 RNF149Q8NC42 400 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 TARS2Q9BW92 718 aaKnown RBP17.66■□□□□ 0.42
VARS-215ENST00000375663 TTYH3Q9C0H2 523 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 ABCF3Q9NUQ8 709 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 SNRPAP09012 282 aaKnown RBP17.66■□□□□ 0.42
VARS-215ENST00000375663 TAL1P17542 331 aaPredicted RBP17.66■□□□□ 0.42
VARS-215ENST00000375663 SHMT1P34896 483 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 RCN1Q15293 331 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 AADACL2Q6P093 401 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 ARID3BQ8IVW6 561 aaPredicted RBP17.66■□□□□ 0.42
VARS-215ENST00000375663 UPF3AQ9H1J1 476 aaKnown RBP17.66■□□□□ 0.42
VARS-215ENST00000375663 SALL4Q9UJQ4 1053 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 NUB1Q9Y5A7 615 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 DNAJC8O75937 253 aaPredicted RBP17.66■□□□□ 0.42
VARS-215ENST00000375663 CTCFP49711 727 aaPredicted RBP17.66■□□□□ 0.42
VARS-215ENST00000375663 SESN2P58004 480 aaPredicted RBP17.66■□□□□ 0.42
VARS-215ENST00000375663 CUL3Q13618 768 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 CCNG2Q16589 344 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 IRF2BP2Q7Z5L9 587 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 CEP70Q8NHQ1 597 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 AGR3Q8TD06 166 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 NAF1Q96HR8 494 aaKnown RBP17.66■□□□□ 0.42
VARS-215ENST00000375663 FAM111AQ96PZ2 611 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 C2orf40Q9H1Z8 148 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 SUDS3Q9H7L9 328 aaPredicted RBP17.66■□□□□ 0.42
VARS-215ENST00000375663 ANLNQ9NQW6 1124 aa17.66■□□□□ 0.42
VARS-215ENST00000375663 COL5A2P05997 1499 aaPredicted RBP17.66■□□□□ 0.42
VARS-215ENST00000375663 TLR2O60603 784 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms