RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 CNTNAP3BQ96NU0 1288 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 CNTNAP3Q9BZ76 1288 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 ZFP14Q9HCL3 533 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 HEBP1Q9NRV9 189 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 RAB23Q9ULC3 237 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 MYMKA6NI61 221 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 SHISA7A6NL88 538 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 LRP3O75074 770 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 HIP1RO75146 1068 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 ABLIM3O94929 683 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 ATF2P15336 505 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 TGM1P22735 817 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 GUCY2CP25092 1073 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 TKTP29401 623 aaKnown RBP13.26□□□□□ -0.29
LSM2-208ENST00000375661 ELF1P32519 619 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 CLCNKBP51801 687 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 PRSS36Q5K4E3 855 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 TANGO2Q6ICL3 276 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 CD300LGQ6UXG3 332 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 GPBP1Q86WP2 473 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 TCEAL8Q8IYN2 117 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 ZNF687Q8N1G0 1237 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 CELF5Q8N6W0 485 aaKnown RBP13.26□□□□□ -0.29
LSM2-208ENST00000375661 IQUBQ8NA54 791 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 BSNDQ8WZ55 320 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 IRF7Q92985 503 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 PLA2G2FQ9BZM2 168 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 CXCL16Q9H2A7 254 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 CUEDC2Q9H467 287 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 KCND2Q9NZV8 630 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 SERTAD1Q9UHV2 236 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 MAFFQ9ULX9 164 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 GDAQ9Y2T3 454 aa13.26□□□□□ -0.29
LSM2-208ENST00000375661 CACNA1BQ00975 2339 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 GOLGA6L4A6NEF3 574 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 H7C4K7 107 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 PRRG1O14668 218 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 SYN3O14994 580 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 ACTN4O43707 911 aaKnown RBP13.25□□□□□ -0.29
LSM2-208ENST00000375661 TDGF1P13385 188 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 CEBPBP17676 345 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 FCARP24071 287 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 SYKP43405 635 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 CCR3P51677 355 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 MLLT6P55198 1093 aaPredicted RBP13.25□□□□□ -0.29
LSM2-208ENST00000375661 ROR1Q01973 937 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 CACNB1Q02641 598 aaPredicted RBP13.25□□□□□ -0.29
LSM2-208ENST00000375661 RAD51AP2Q09MP3 1159 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 MTAPQ13126 283 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 XKR4Q5GH76 650 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 EEF1DP3Q658K8 133 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 LAIR1Q6GTX8 287 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 C1orf228Q6PIY5 440 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 TSSK4Q6SA08 328 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 SV2BQ7L1I2 683 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 LEMD2Q8NC56 503 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 ENGASEQ8NFI3 743 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 IFT74Q96LB3 600 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 TRMT61BQ9BVS5 477 aaKnown RBP13.25□□□□□ -0.29
LSM2-208ENST00000375661 BRD9Q9H8M2 597 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 TOPORSQ9NS56 1045 aaPredicted RBP13.25□□□□□ -0.29
LSM2-208ENST00000375661 SLC38A7Q9NVC3 462 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 KBTBD4Q9NVX7 518 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 USP18Q9UMW8 372 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 TNFSF13BQ9Y275 285 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 GPR179Q6PRD1 2367 aa13.25□□□□□ -0.29
LSM2-208ENST00000375661 PHLPP2Q6ZVD8 1323 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 SMIM28A0A1B0GU29 152 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 WDR27A2RRH5 827 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 PRPF40AO75400 957 aaKnown RBP13.24□□□□□ -0.29
LSM2-208ENST00000375661 SLFN14P0C7P3 912 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 GRM5P41594 1212 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 YARSP54577 528 aaKnown RBP13.24□□□□□ -0.29
LSM2-208ENST00000375661 GLRA4Q5JXX5 417 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 ATF7IP2Q5U623 682 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 TPGS2Q68CL5 300 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 PDZD4Q76G19 769 aaPredicted RBP13.24□□□□□ -0.29
LSM2-208ENST00000375661 MAP4K3Q8IVH8 894 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 FMR1NBQ8N0W7 255 aaPredicted RBP13.24□□□□□ -0.29
LSM2-208ENST00000375661 ELMOD1Q8N336 334 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 DEPDC1BQ8WUY9 529 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 FAM3CQ92520 227 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 KIFAP3Q92845 792 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 DNAJC19Q96DA6 116 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 MSANTD3Q96H12 275 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 ASB16Q96NS5 453 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 REEP2Q9BRK0 252 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 PYM1Q9BRP8 204 aaKnown RBP13.24□□□□□ -0.29
LSM2-208ENST00000375661 TIPINQ9BVW5 301 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 CCDC94Q9BW85 323 aaPredicted RBP13.24□□□□□ -0.29
LSM2-208ENST00000375661 TNMDQ9H2S6 317 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 ZNF334Q9HCZ1 680 aaPredicted RBP13.24□□□□□ -0.29
LSM2-208ENST00000375661 NCOR2Q9Y618 2525 aa13.24□□□□□ -0.29
LSM2-208ENST00000375661 F5P12259 2224 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 SFI1A8K8P3 1242 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 FOXD2O60548 495 aaPredicted RBP13.23□□□□□ -0.29
LSM2-208ENST00000375661 ZNF202O95125 648 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 EDN1P05305 212 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 RETP07949 1114 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 ADRB1P08588 477 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms