RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 FAM193BQ96PV7 902 aaPredicted RBP13.19□□□□□ -0.3
SDHD-201ENST00000375549 NIF3L1Q9GZT8 377 aa13.19□□□□□ -0.3
SDHD-201ENST00000375549 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
SDHD-201ENST00000375549 TBC1D13Q9NVG8 400 aa13.19□□□□□ -0.3
SDHD-201ENST00000375549 POLIQ9UNA4 740 aa13.19□□□□□ -0.3
SDHD-201ENST00000375549 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.19□□□□□ -0.3
SDHD-201ENST00000375549 RALGAPA2Q2PPJ7 1873 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 PODXLO00592 558 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 PIRO00625 290 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 DDHD2O94830 711 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 STAU1O95793 577 aaKnown RBP13.18□□□□□ -0.3
SDHD-201ENST00000375549 PNMA6AP0CW24 399 aaPredicted RBP13.18□□□□□ -0.3
SDHD-201ENST00000375549 P4HA1P13674 534 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 TBXAS1P24557 533 aaPredicted RBP13.18□□□□□ -0.3
SDHD-201ENST00000375549 USP8P40818 1118 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 PNPLA4P41247 253 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 STAT1P42224 750 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 TAF6P49848 677 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 CLCNKBP51801 687 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 JAM2P57087 298 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 TNNC1P63316 161 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 GCNT1Q02742 428 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 ARID5AQ03989 594 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 TUSC3Q13454 348 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 PAN2Q504Q3 1202 aaKnown RBP13.18□□□□□ -0.3
SDHD-201ENST00000375549 TMEM240Q5SV17 173 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 LCE2DQ5TA82 110 aaPredicted RBP13.18□□□□□ -0.3
SDHD-201ENST00000375549 SFMBT2Q5VUG0 894 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 PSRC1Q6PGN9 363 aaPredicted RBP13.18□□□□□ -0.3
SDHD-201ENST00000375549 ENOSF1Q7L5Y1 443 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 TMCO2Q7Z6W1 182 aaPredicted RBP13.18□□□□□ -0.3
SDHD-201ENST00000375549 ZNF280BQ86YH2 543 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 LRRC8AQ8IWT6 810 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 TOP1MTQ969P6 601 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 FAM81BQ96LP2 452 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 ZNF560Q96MR9 790 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 ZNF830Q96NB3 372 aaPredicted RBP13.18□□□□□ -0.3
SDHD-201ENST00000375549 PANX2Q96RD6 677 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 MMS19Q96T76 1030 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 ARID3AQ99856 593 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.18□□□□□ -0.31e-6■■■□□ 16.2
SDHD-201ENST00000375549 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
SDHD-201ENST00000375549 ZNHIT6Q9NWK9 470 aaKnown RBP13.18□□□□□ -0.3
SDHD-201ENST00000375549 ANK1P16157 1881 aa13.18□□□□□ -0.3
SDHD-201ENST00000375549 ALPK3Q96L96 1907 aa13.17□□□□□ -0.3
SDHD-201ENST00000375549 F8VZ95 297 aa13.17□□□□□ -0.3
SDHD-201ENST00000375549 FOXN3O00409 490 aaPredicted RBP13.17□□□□□ -0.3
SDHD-201ENST00000375549 GFPT2O94808 682 aa13.17□□□□□ -0.3
SDHD-201ENST00000375549 RPL9P32969 192 aaKnown RBP13.17□□□□□ -0.3
SDHD-201ENST00000375549 SV2CQ496J9 727 aa13.17□□□□□ -0.3
SDHD-201ENST00000375549 TRIM44Q96DX7 344 aaPredicted RBP13.17□□□□□ -0.3
SDHD-201ENST00000375549 DDX27Q96GQ7 796 aaKnown RBP13.17□□□□□ -0.3
SDHD-201ENST00000375549 UROC1Q96N76 676 aa13.17□□□□□ -0.3
SDHD-201ENST00000375549 DNAJC7Q99615 494 aa13.17□□□□□ -0.3
SDHD-201ENST00000375549 PAAF1Q9BRP4 392 aa13.17□□□□□ -0.3
SDHD-201ENST00000375549 MRPL9Q9BYD2 267 aaKnown RBP13.17□□□□□ -0.3
SDHD-201ENST00000375549 GPR88Q9GZN0 384 aa13.17□□□□□ -0.3
SDHD-201ENST00000375549 VRTNQ9H8Y1 702 aa13.17□□□□□ -0.3
SDHD-201ENST00000375549 MYO6Q9UM54 1294 aa13.17□□□□□ -0.3
SDHD-201ENST00000375549 SNX9Q9Y5X1 595 aa13.17□□□□□ -0.3
SDHD-201ENST00000375549 NR2E3Q9Y5X4 410 aa13.17□□□□□ -0.3
SDHD-201ENST00000375549 KPNA7A9QM74 516 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 SPTLC1O15269 473 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 B4GALT3O60512 393 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 DGKIO75912 1065 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 WEE2P0C1S8 567 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 KRT5P13647 590 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 CD58P19256 250 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 SOX5P35711 763 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 ASPAP45381 313 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 RAP1GAPP47736 663 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 OR1G1P47890 313 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 DSC1Q08554 894 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 ASIC2Q16515 512 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 UPP1Q16831 310 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 E4F1Q66K89 784 aaPredicted RBP13.16□□□□□ -0.3
SDHD-201ENST00000375549 COLGALT2Q8IYK4 626 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 SMYD3Q9H7B4 428 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 DNAJB4Q9UDY4 337 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 PCDHB4Q9Y5E5 795 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 TET1Q8NFU7 2136 aa13.16□□□□□ -0.3
SDHD-201ENST00000375549 CITO14578 2027 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 NRDCO43847 1150 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 B3GAT3O94766 335 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 SKILP12757 684 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 IGFBP6P24592 240 aaPredicted RBP13.15□□□□□ -0.3
SDHD-201ENST00000375549 CDH8P55286 799 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 LILRA4P59901 499 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 YWHAEP62258 255 aaKnown RBP13.15□□□□□ -0.3
SDHD-201ENST00000375549 DCLRE1AQ6PJP8 1040 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 DSTYKQ6XUX3 929 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 LRRC43Q8N309 656 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 HASPINQ8TF76 798 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 RSPH1Q8WYR4 309 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 SHC3Q92529 594 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 SYN2Q92777 582 aaPredicted RBP13.15□□□□□ -0.3
SDHD-201ENST00000375549 JAKMIP2Q96AA8 810 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 FAXDC2Q96IV6 333 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 BAG1Q99933 345 aaPredicted RBP13.15□□□□□ -0.3
SDHD-201ENST00000375549 BCO2Q9BYV7 579 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms