RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 MRPL4Q9BYD3 311 aaKnown RBP10.67□□□□□ -0.7
PTCH1-204ENST00000375290 DTNAQ9Y4J8 743 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 COL15A1P39059 1388 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 MYL2P10916 166 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 KCTD2Q14681 263 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 NEDD1Q8NHV4 660 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 SEPT8Q92599 483 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 ZNF560Q96MR9 790 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 NEDD4P46934 1319 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 ADORA1P30542 326 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 CARSP49589 748 aaKnown RBP10.66□□□□□ -0.7
PTCH1-204ENST00000375290 DYNLT1P63172 113 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 ADCY1Q08828 1119 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 PTK6Q13882 451 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 TBC1D10CQ8IV04 446 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 NLGN1Q8N2Q7 840 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 PPHLN1Q8NEY8 458 aaKnown RBP10.66□□□□□ -0.7
PTCH1-204ENST00000375290 PCDHGB4Q9UN71 923 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 MAGEB2O15479 319 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 PDK2Q15119 407 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 BOLA3Q53S33 107 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 LRRC39Q96DD0 335 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 GDF3Q9NR23 364 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 RAD54BQ9Y620 910 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 COILP38432 576 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-204ENST00000375290 MTMR1Q13613 665 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 CNGA2Q16280 664 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 PARP6Q2NL67 630 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 SLC13A5Q86YT5 568 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-204ENST00000375290 VPS11Q9H270 941 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 TIMM50Q3ZCQ8 353 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 EFHC1Q5JVL4 640 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 MED15Q96RN5 788 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 TMCO1Q9UM00 188 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 ADGRA2Q96PE1 1338 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 ADRA2BP18089 450 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 MTFR1Q15390 333 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 TAF2Q6P1X5 1199 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 TNIP3Q96KP6 325 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 KBTBD4Q9NVX7 518 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-204ENST00000375290 ENO1P06733 434 aaKnown RBP10.66□□□□□ -0.7
PTCH1-204ENST00000375290 ABHD2P08910 425 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 MMP14P50281 582 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 MEI1Q5TIA1 1274 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 RNF139Q8WU17 664 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 PNKPQ96T60 521 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 BTBD10Q9BSF8 475 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 ZBTB24O43167 697 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-204ENST00000375290 RPL22P35268 128 aaKnown RBP10.66□□□□□ -0.7
PTCH1-204ENST00000375290 CLK1P49759 484 aaKnown RBP10.66□□□□□ -0.7
PTCH1-204ENST00000375290 TAB1Q15750 504 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 TMTC4Q5T4D3 741 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 OR6B2Q6IFH4 312 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 C18orf8Q96DM3 657 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 GOLPH3Q9H4A6 298 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 RNPEPL1Q9HAU8 725 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 CAB39Q9Y376 341 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-204ENST00000375290 CRB1P82279 1406 aa10.66□□□□□ -0.7
PTCH1-204ENST00000375290 PPP1R3GB7ZBB8 358 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 GOLGA8SH3BPF8 625 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 ALOX5P09917 674 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 MXD4Q14582 209 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-204ENST00000375290 PDK1Q15118 436 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 TFDP3Q5H9I0 405 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 PPP4R4Q6NUP7 873 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 SETD9Q8NE22 299 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 HEXIM2Q96MH2 286 aaKnown RBP10.65□□□□□ -0.7
PTCH1-204ENST00000375290 EPAS1Q99814 870 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 BDH2Q9BUT1 245 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 KCNK4Q9NYG8 393 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 FAM153AQ9UHL3 310 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 VPS4BO75351 444 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 PECAM1P16284 738 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-204ENST00000375290 IL1RL1Q01638 556 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 FAM83EQ2M2I3 478 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 IGDCC4Q8TDY8 1250 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 USP13Q92995 863 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-204ENST00000375290 FAM149B1Q96BN6 582 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 KIAA1257Q9ULG3 409 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 ZNF609O15014 1411 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 TNS3Q68CZ2 1445 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 A0A087WXM4 84 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 BLVRAP53004 296 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 CCNG2Q16589 344 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 S100ZQ8WXG8 99 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 TMEM47Q9BQJ4 181 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 IGSF9BQ9UPX0 1349 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 C3orf70A6NLC5 250 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-204ENST00000375290 TULP2O00295 520 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 MAPTP10636 758 aaKnown RBP10.65□□□□□ -0.7
PTCH1-204ENST00000375290 GNAT1P11488 350 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 NAPEPLDQ6IQ20 393 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 B3GNT6Q6ZMB0 384 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 ADNPQ9H2P0 1102 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 BTG4Q9NY30 223 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 NUDT17P0C025 328 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 NPR1P16066 1061 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 BBS7Q8IWZ6 715 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 CLEC4FQ8N1N0 589 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms