RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 GIPC2Q8TF65 315 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 SEMA4AQ9H3S1 761 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 KCNH7Q9NS40 1196 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 FAM153AQ9UHL3 310 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 ZBBXA8MT70 800 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 PRKCBP05771 671 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 TARSP26639 723 aaKnown RBP12.13□□□□□ -0.47
PTCH1-203ENST00000375274 ERVK-9P63128 1117 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 ZBTB17Q13105 803 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 CNGA3Q16281 694 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 FASTKD1Q53R41 847 aaKnown RBP12.13□□□□□ -0.47
PTCH1-203ENST00000375274 ITPRIPL1Q6GPH6 555 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 TEX9Q8N6V9 391 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 MANSC1Q9H8J5 431 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 PCMTD2Q9NV79 361 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 A0A0U1RQJ8 604 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 PIK3R2O00459 728 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 ATP9BO43861 1147 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 KRT4P19013 534 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 PTENP60484 403 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 DLGAP2Q9P1A6 1054 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 PHTF1Q9UMS5 762 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 H3BRJ5 948 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 SGPL1O95470 568 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 ANP32DO95626 131 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 SERPINB9P50453 376 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 PGBD4Q96DM1 585 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 NSL1Q96IY1 281 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 KDM4CQ9H3R0 1056 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 RPAP3Q9H6T3 665 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-203ENST00000375274 PAK5Q9P286 719 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 GTPBP10A4D1E9 387 aaKnown RBP12.12□□□□□ -0.47
PTCH1-203ENST00000375274 UBOX5O94941 541 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 TSTA3Q13630 321 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-203ENST00000375274 ABI1Q8IZP0 508 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 NDUFAF2Q8N183 169 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 DDX20Q9UHI6 824 aaKnown RBP12.12□□□□□ -0.47
PTCH1-203ENST00000375274 PDE2AO00408 941 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-203ENST00000375274 ADORA2BP29275 332 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 GEMIN4P57678 1058 aaKnown RBP12.12□□□□□ -0.47
PTCH1-203ENST00000375274 KCNMA1Q12791 1236 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 TRIP10Q15642 601 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 SMTNL2Q2TAL5 461 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 ARID3BQ8IVW6 561 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-203ENST00000375274 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 KCNK16Q96T55 309 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 EHD4Q9H223 541 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 RIOX1Q9H6W3 641 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 ATP8B3O60423 1300 aa12.12□□□□□ -0.47
PTCH1-203ENST00000375274 CLTCQ00610 1675 aaKnown RBP12.11□□□□□ -0.47
PTCH1-203ENST00000375274 PJA2O43164 708 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 CPA2P48052 419 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 HABP4Q5JVS0 413 aaKnown RBP12.11□□□□□ -0.47
PTCH1-203ENST00000375274 GPAT2Q6NUI2 795 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 MTHFD1LQ6UB35 978 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 TSEN2Q8NCE0 465 aaKnown RBP12.11□□□□□ -0.47
PTCH1-203ENST00000375274 LPAR1Q92633 364 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 KIF12Q96FN5 646 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 RSAD1Q9HA92 442 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 WHRNQ9P202 907 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 IGSF9BQ9UPX0 1349 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 TYW5A2RUC4 315 aaKnown RBP12.11□□□□□ -0.47
PTCH1-203ENST00000375274 PPP1R12AO14974 1030 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-203ENST00000375274 NME3Q13232 169 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 NLRP9Q7RTR0 991 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 CBWD2Q8IUF1 395 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 PPIL6Q8IXY8 311 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 E2F7Q96AV8 911 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 CBWD1Q9BRT8 395 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 ANKEF1Q9NU02 776 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 POLRMTO00411 1230 aaKnown RBP12.11□□□□□ -0.47
PTCH1-203ENST00000375274 GTF2H1P32780 548 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 IREB2P48200 963 aaKnown RBP12.11□□□□□ -0.47
PTCH1-203ENST00000375274 OVGP1Q12889 678 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 CATSPER1Q8NEC5 780 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 OR6P1Q8NGX9 317 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 AGAP3Q96P47 875 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 CACYBPQ9HB71 228 aaKnown RBP12.11□□□□□ -0.47
PTCH1-203ENST00000375274 HAO1Q9UJM8 370 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 KLHL2O95198 593 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 CYP11B1P15538 503 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 VHLP40337 213 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 RGS7P49802 495 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 SKOR1P84550 965 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 ZNF844Q08AG5 666 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 BIRC2Q13490 618 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 CRYMQ14894 314 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 C2CD6Q53TS8 623 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 TMC3Q7Z5M5 1100 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 TXNRD3Q86VQ6 643 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 RNF135Q8IUD6 432 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 CNPY4Q8N129 248 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 TARS2Q9BW92 718 aaKnown RBP12.11□□□□□ -0.47
PTCH1-203ENST00000375274 MOV10L1Q9BXT6 1211 aaKnown RBP12.11□□□□□ -0.47
PTCH1-203ENST00000375274 MAGEB5Q9BZ81 275 aa12.11□□□□□ -0.47
PTCH1-203ENST00000375274 O00370 1275 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 MAPRE2Q15555 327 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 LRRC6Q86X45 466 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms