RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 TXNDC11Q6PKC3 985 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 ERICH1Q86X53 443 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 FMR1NBQ8N0W7 255 aaPredicted RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 DNAAF3Q8N9W5 541 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 NCLNQ969V3 563 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 INTS2Q9H0H0 1204 aaKnown RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 COQ6Q9Y2Z9 468 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 SH3D21A4FU49 640 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 PLK4O00444 970 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 AIM2O14862 343 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 PRKAR1AP10644 381 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 LRRC14Q15048 493 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 BBS5Q8N3I7 341 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 CNKSR1Q969H4 720 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 MYD88Q99836 296 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 DCLK3Q9C098 648 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 BFARQ9NZS9 450 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 DENND2AQ9ULE3 1009 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 TNFRSF8P28908 595 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 SLC29A2Q14542 456 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 REXO1Q8N1G1 1221 aaKnown RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 LRRC20Q8TCA0 184 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 AGBL1Q96MI9 1066 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 NT5C1BQ96P26 610 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 MNTQ99583 582 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 MYL10Q9BUA6 226 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 SPATA16Q9BXB7 569 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 WDR35Q9P2L0 1181 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 RNF103O00237 685 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 SEC24DO94855 1032 aaPredicted RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 CNTFP26441 200 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 RAD51Q06609 339 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 TTC39BQ5VTQ0 682 aaPredicted RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 KHDRBS2Q5VWX1 349 aaKnown RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 TAF8Q7Z7C8 310 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 VCPIP1Q96JH7 1222 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 PEX1O43933 1283 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 MGRN1O60291 552 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 ATP1A1P05023 1023 aaKnown RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 ATP1A3P13637 1013 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 TCF4P15884 667 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 CCDC28AQ8IWP9 274 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 PLEKHA8Q96JA3 519 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 PRRG3Q9BZD7 231 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 CYLDQ9NQC7 956 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 PCDHGB4Q9UN71 923 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 PCDHGC5Q9Y5F6 944 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 BAZ1AQ9NRL2 1556 aaPredicted RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 CDK7P50613 346 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 NAA20P61599 178 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 TRAF2Q12933 501 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 FKBP9P1Q75LS8 142 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 C12orf66Q96MD2 445 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 RNF26Q9BY78 433 aaPredicted RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 ZNF221Q9UK13 617 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 TRIM64A6NGJ6 449 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 TRIM64BA6NI03 449 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 CLOCKO15516 846 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 CCNKO75909 580 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 ADSSP30520 456 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 MAGEA10P43363 369 aaPredicted RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 PDK3Q15120 406 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 ERICH5Q6P6B1 374 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 SNX32Q86XE0 403 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 AGAP11Q8TF27 550 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 PLEKHG4BQ96PX9 1271 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 DHX36Q9H2U1 1008 aaKnown RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 SEC31BQ9NQW1 1179 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 HAO1Q9UJM8 370 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 PA2G4Q9UQ80 394 aaKnown RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 TSC22D2O75157 780 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 PGDP52209 483 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 ARID5BQ14865 1188 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 ANGPTL8Q6UXH0 198 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 RNFT2Q96EX2 444 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 PLIN2Q99541 437 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 SLC39A3Q9BRY0 314 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 NCOA5Q9HCD5 579 aaKnown RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 KIAA1586Q9HCI6 787 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 PCDH11XQ9BZA7 1347 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 TSPAN1O60635 241 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 FOSP01100 380 aaPredicted RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 ERP29P30040 261 aaKnown RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 MEI1Q5TIA1 1274 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 ARHGEF16Q5VV41 709 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 ADAT2Q7Z6V5 191 aaKnown RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 NUDT12Q9BQG2 462 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 DBR1Q9UK59 544 aaKnown RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 UBOX5O94941 541 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 RRM2P31350 389 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 DMP1Q13316 513 aaPredicted RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 P3H1Q32P28 736 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 LIN52Q52LA3 116 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 ATG14Q6ZNE5 492 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 BARGINQ6ZT62 677 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 POC5Q8NA72 575 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 SH3GLB2Q9NR46 395 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 GNPATO15228 680 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 GRK3P35626 688 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 BROXQ5VW32 411 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms