RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 GRM5P41594 1212 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 PSEN2P49810 448 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 RNASE9P60153 205 aaKnown RBP19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CBX1P83916 185 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 SLC10A6Q3KNW5 377 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 APBB1IPQ7Z5R6 666 aaPredicted RBP19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CD302Q8IX05 232 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 ZNF606Q8WXB4 792 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CPA5Q8WXQ8 436 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 ALG3Q92685 438 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 RNPC3Q96LT9 517 aaKnown RBP19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 GCOM2Q9BZD3 368 aaPredicted RBP19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 GDF3Q9NR23 364 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 C2CD2Q9Y426 696 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 SCN10AQ9Y5Y9 1956 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CCDC66A2RUB6 948 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 TNPO2O14787 897 aaKnown RBP19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 MYBL2P10244 700 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CTNNA1P35221 906 aaKnown RBP19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 PEX5P50542 639 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 C1QBPQ07021 282 aaKnown RBP19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CRHR2Q13324 411 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CASP8Q14790 479 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 LIN9Q5TKA1 542 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 IFT20Q8IY31 132 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 AP5M1Q9H0R1 490 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 SLITRK6Q9H5Y7 841 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 VIPAS39Q9H9C1 493 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 TMEM110-MUSTN1A8MSY1 372 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 KRIT1O00522 736 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 STAU1O95793 577 aaKnown RBP19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CFHP08603 1231 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CYP2C9P11712 490 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 RRM1P23921 792 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 TM4SF4P48230 202 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 SLC7A5Q01650 507 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 PTP4A2Q12974 167 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 PPP2R5EQ16537 467 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 KIZQ2M2Z5 673 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 ZNF667Q5HYK9 610 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 LENG1Q96BZ8 264 aaPredicted RBP19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 ACAP3Q96P50 834 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 KATNAL1Q9BW62 490 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 FAM124BQ9H5Z6 455 aaPredicted RBP19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CHORDC1Q9UHD1 332 aaPredicted RBP19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 PCDHGC3Q9UN70 934 aa19.19■□□□□ 0.66
HLA-DQB1-201ENST00000374943 BHMG1C9JSJ3 638 aaPredicted RBP19.18■□□□□ 0.66
HLA-DQB1-201ENST00000374943 HEXIM1O94992 359 aaKnown RBP19.18■□□□□ 0.66
HLA-DQB1-201ENST00000374943 FGGP02679 453 aa19.18■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CDH5P33151 784 aaPredicted RBP19.18■□□□□ 0.66
HLA-DQB1-201ENST00000374943 TMEM132DQ14C87 1099 aa19.18■□□□□ 0.66
HLA-DQB1-201ENST00000374943 KRT35Q92764 455 aa19.18■□□□□ 0.66
HLA-DQB1-201ENST00000374943 ZNF518BQ9C0D4 1074 aa19.18■□□□□ 0.66
HLA-DQB1-201ENST00000374943 ADAM22Q9P0K1 906 aa19.18■□□□□ 0.66
HLA-DQB1-201ENST00000374943 ANAPC7Q9UJX3 599 aa19.18■□□□□ 0.66
HLA-DQB1-201ENST00000374943 ITGA11Q9UKX5 1188 aa19.18■□□□□ 0.66
HLA-DQB1-201ENST00000374943 PCDHA3Q9Y5H8 950 aa19.18■□□□□ 0.66
HLA-DQB1-201ENST00000374943 RAD51CO43502 376 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 SPOPO43791 374 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 ECM2O94769 699 aaPredicted RBP19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 GLI1P08151 1106 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 DARSP14868 501 aaKnown RBP19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CD58P19256 250 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 HOXA11P31270 313 aaPredicted RBP19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 HOXC8P31273 242 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 SLC1A1P43005 524 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 PLEKHA7Q6IQ23 1121 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 EIF1ADQ8N9N8 165 aaKnown RBP19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 HHIPL1Q96JK4 782 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 AP1M1Q9BXS5 423 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 FAM49AQ9H0Q0 323 aaPredicted RBP19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 PLEKHA5Q9HAU0 1116 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CYP3A43Q9HB55 503 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 MRPL47Q9HD33 250 aaKnown RBP19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 DERAQ9Y315 318 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 SCINQ9Y6U3 715 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CA12O43570 354 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 ITGB3P05106 788 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 KRT19P08727 400 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 PAEPP09466 180 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 WEE2P0C1S8 567 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 AKR1A1P14550 325 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 MMP8P22894 467 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 AXLP30530 894 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 MARCKSL1P49006 195 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 EPHB4P54760 987 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 HIC1Q14526 733 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 SLC27A1Q6PCB7 646 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 EMBQ6PCB8 327 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 SCARA5Q6ZMJ2 495 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 RUFY4Q6ZNE9 571 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 PASD1Q8IV76 773 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 KLHL7Q8IXQ5 586 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 BTBD6Q96KE9 485 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 C11orf70Q9BRQ4 267 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 POLIQ9UNA4 740 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 SCN1AP35498 2009 aa19.17■□□□□ 0.66
HLA-DQB1-201ENST00000374943 SART1O43290 800 aaKnown RBP19.16■□□□□ 0.66
HLA-DQB1-201ENST00000374943 MYL3P08590 195 aa19.16■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CTGFP29279 349 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms