RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TNNI2P48788 182 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 SULT2A1Q06520 285 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 HYIQ5T013 277 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 CCDC62Q6P9F0 684 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 RNF168Q8IYW5 571 aaPredicted RBP21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 FBXO27Q8NI29 283 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 SKA1Q96BD8 255 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 CLPTM1LQ96KA5 538 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 BCAS3Q9H6U6 928 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 RMI1Q9H9A7 625 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 DDX18Q9NVP1 670 aaKnown RBP21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 PTTG2Q9NZH5 202 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 SBF2Q86WG5 1849 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 C2orf71A6NGG8 1288 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 UBAP1LF5GYI3 381 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 FSCN2O14926 492 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 BUD23O43709 281 aaKnown RBP21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 MAGEA4P43358 317 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 ARFIP2P53365 341 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 LRRC36Q1X8D7 754 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 DGCR14Q96DF8 476 aaKnown RBP21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 TTC25Q96NG3 672 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 ARHGEF4Q9NR80 690 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 DDX25Q9UHL0 483 aaKnown RBP21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 VILLO15195 856 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 PGM3O95394 542 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 RFC4P35249 363 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 RGS2P41220 211 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 AP2B1P63010 937 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 HNRNPDQ14103 355 aaKnown RBP21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 ZNF554Q86TJ5 538 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 RASSF3Q86WH2 238 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 MAK16Q9BXY0 300 aaKnown RBP21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 OSBPL8Q9BZF1 889 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 ARMCX1Q9P291 453 aa21.74■■□□□ 1.07
TMEFF1-201ENST00000374879 SNED1Q8TER0 1413 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 ADRA1DP25100 572 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 GALK1P51570 392 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 SLC12A3P55017 1021 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 MED21Q13503 144 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 GRM2Q14416 872 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 HP1BP3Q5SSJ5 553 aaPredicted RBP21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 LRRC6Q86X45 466 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 ARHGAP24Q8N264 748 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 POLR3CQ9BUI4 534 aaPredicted RBP21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 C12orf65Q9H3J6 166 aaKnown RBP21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 KCNK13Q9HB14 408 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 KDM3AQ9Y4C1 1321 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 B2RBV5 119 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 SLC16A3O15427 465 aaKnown RBP21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 CBWD6Q4V339 395 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 CBWD3Q5JTY5 395 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 CBWD5Q5RIA9 395 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 C16orf86Q6ZW13 317 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 MAP7D3Q8IWC1 876 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 OR6Y1Q8NGX8 325 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 RBM15Q96T37 977 aaKnown RBP eCLIP21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 MXD3Q9BW11 206 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 TMEM120AQ9BXJ8 343 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 TRIM55Q9BYV6 548 aa21.73■■□□□ 1.07
TMEFF1-201ENST00000374879 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 DNAJC6O75061 913 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 CD151P48509 253 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 FMO5P49326 533 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 KIF22Q14807 665 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 KRT72Q14CN4 511 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 CAPN12Q6ZSI9 719 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 PDSS2Q86YH6 399 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 SCUBE1Q8IWY4 988 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 NEDD1Q8NHV4 660 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 ZNF653Q96CK0 615 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 ALG13Q9NP73 1137 aaKnown RBP21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 MAGEC1O60732 1142 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 CDK4P11802 303 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 CDK16Q00536 496 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 SFT2D3Q587I9 215 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 NET1Q7Z628 596 aaPredicted RBP21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 ZNF276Q8N554 614 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 SLC25A41Q8N5S1 370 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 CCDC110Q8TBZ0 833 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 PSPC1Q8WXF1 523 aaKnown RBP21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 SLC35B4Q969S0 331 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 CEP95Q96GE4 821 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 HERPUD2Q9BSE4 406 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 LRRC4BQ9NT99 713 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 TUBGCP4Q9UGJ1 667 aa21.72■■□□□ 1.07
TMEFF1-201ENST00000374879 C10orf71Q711Q0 1435 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 PIM1P11309 404 aaPredicted RBP21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 TCEAL1Q15170 157 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 IZUMO3Q5VZ72 239 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 B3GNT6Q6ZMB0 384 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 RBM44Q6ZP01 1051 aaKnown RBP21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 ESYT2A0FGR8 921 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 H3BRJ5 948 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 ABHD2P08910 425 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 PLS3P13797 630 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 KRT4P19013 534 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 ADCY7P51828 1080 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 ACTR3P61158 418 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms