RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ELF4Q99607 663 aaPredicted RBP5.55□□□□□ -1.52
USP48-202ENST00000374730 LLPHQ9BRT6 129 aaKnown RBP5.55□□□□□ -1.52
USP48-202ENST00000374730 AGXT2Q9BYV1 514 aa5.55□□□□□ -1.52
USP48-202ENST00000374730 PITHD1Q9GZP4 211 aaPredicted RBP5.55□□□□□ -1.52
USP48-202ENST00000374730 AGO3Q9H9G7 860 aaKnown RBP5.55□□□□□ -1.52
USP48-202ENST00000374730 TLR9Q9NR96 1032 aa5.55□□□□□ -1.52
USP48-202ENST00000374730 ZKSCAN5Q9Y2L8 839 aa5.55□□□□□ -1.52
USP48-202ENST00000374730 ECM29Q5VYK3 1845 aa5.55□□□□□ -1.52
USP48-202ENST00000374730 TIAM2Q8IVF5 1701 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 A0A1W2PRX2 142 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 VPS37CA5D8V6 355 aaPredicted RBP5.54□□□□□ -1.52
USP48-202ENST00000374730 GOLIM4O00461 696 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 RNF113AO15541 343 aaKnown RBP5.54□□□□□ -1.52
USP48-202ENST00000374730 FIBPO43427 364 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 PFKFB2O60825 505 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 CLSTN1O94985 981 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 SLC9A1P19634 815 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 HSD3B2P26439 372 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 ANTXR2P58335 489 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 ADAM8P78325 824 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 KRT85P78386 507 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 MYBPC3Q14896 1274 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 CCDC57Q2TAC2 916 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 LRRC24Q50LG9 513 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 CCDC129Q6ZRS4 1044 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 STOX1Q6ZVD7 989 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 KANSL1Q7Z3B3 1105 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 FBXL16Q8N461 479 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 D2HGDHQ8N465 521 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 C7orf31Q8N865 590 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 NECAB1Q8N987 351 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 PIGBQ92521 554 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 APPBP2Q92624 585 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 EXTL1Q92935 676 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 NINJ1Q92982 152 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 CHMP4CQ96CF2 233 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 NEUROD6Q96NK8 337 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 SEC62Q99442 399 aaKnown RBP5.54□□□□□ -1.52
USP48-202ENST00000374730 OXSMQ9NWU1 459 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.54□□□□□ -1.52
USP48-202ENST00000374730 CD2APQ9Y5K6 639 aa5.54□□□□□ -1.52
USP48-202ENST00000374730 MYH14Q7Z406 1995 aaKnown RBP5.54□□□□□ -1.52
USP48-202ENST00000374730 SLIT2O94813 1529 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 SCN7AQ01118 1682 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 WDR19Q8NEZ3 1342 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 C2orf78A6NCI8 922 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 ERVV-1B6SEH8 477 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 GAS7O60861 476 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 F2P00734 622 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 CYP19A1P11511 503 aaPredicted RBP5.53□□□□□ -1.52
USP48-202ENST00000374730 ATP2A2P16615 1042 aaKnown RBP5.53□□□□□ -1.52
USP48-202ENST00000374730 MCM5P33992 734 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 IL6STP40189 918 aaPredicted RBP5.53□□□□□ -1.52
USP48-202ENST00000374730 EVCP57679 992 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 TIMM10P62072 90 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 HMGN5P82970 282 aaKnown RBP5.53□□□□□ -1.52
USP48-202ENST00000374730 ATP2C1P98194 919 aaPredicted RBP5.53□□□□□ -1.52
USP48-202ENST00000374730 EXOSC10Q01780 885 aaKnown RBP5.53□□□□□ -1.52
USP48-202ENST00000374730 DSG1Q02413 1049 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 IFIT5Q13325 482 aaKnown RBP5.53□□□□□ -1.52
USP48-202ENST00000374730 CCDC158Q5M9N0 1113 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 TTC39AQ5SRH9 613 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 NAA16Q6N069 864 aaPredicted RBP5.53□□□□□ -1.52
USP48-202ENST00000374730 TIGD7Q6NT04 549 aaPredicted RBP5.53□□□□□ -1.52
USP48-202ENST00000374730 CLEC14AQ86T13 490 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 EFHBQ8N7U6 833 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 IL17DQ8TAD2 202 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 DYDC2Q96IM9 177 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 TCEANC2Q96MN5 208 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 WDR92Q96MX6 357 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 FUCA2Q9BTY2 467 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 ZNF341Q9BYN7 854 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 PUS3Q9BZE2 481 aaKnown RBP5.53□□□□□ -1.52
USP48-202ENST00000374730 TOMM22Q9NS69 142 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 MAGEL2Q9UJ55 1249 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 ASAP1Q9ULH1 1129 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 NOL7Q9UMY1 257 aaKnown RBP5.53□□□□□ -1.52
USP48-202ENST00000374730 GIT1Q9Y2X7 761 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 KIF3AQ9Y496 699 aa5.53□□□□□ -1.52
USP48-202ENST00000374730 LTBP4Q8N2S1 1624 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 SALL1Q9NSC2 1324 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 A0A0A6YYJ9 748 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 CAPN14A8MX76 684 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 E7EWF7 191 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 ZNF500O60304 480 aaPredicted RBP5.52□□□□□ -1.53
USP48-202ENST00000374730 SLPIP03973 132 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 HSPD1P10809 573 aaKnown RBP5.52□□□□□ -1.53
USP48-202ENST00000374730 MSNP26038 577 aaKnown RBP5.52□□□□□ -1.53
USP48-202ENST00000374730 ADORA1P30542 326 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 HIBADHP31937 336 aaKnown RBP5.52□□□□□ -1.53
USP48-202ENST00000374730 BPIFB4P59827 614 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 ADCY2Q08462 1091 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 RESTQ13127 1097 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 LRRC32Q14392 662 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 ATP2B3Q16720 1220 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 PTPROQ16827 1216 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 TAF7LQ5H9L4 462 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 KIAA1841Q6NSI8 718 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 ZSCAN25Q6NSZ9 544 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms