RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 NCAPHQ15003 741 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 SV2CQ496J9 727 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 FAM171A1Q5VUB5 890 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 KIAA0319Q5VV43 1072 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 TCERG1LQ5VWI1 586 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 TDRD10Q5VZ19 366 aaKnown RBP12.24□□□□□ -0.45
HSPG2-202ENST00000374676 SCARA3Q6AZY7 606 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 TMC7Q7Z402 723 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 HASPINQ8TF76 798 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 HPDLQ96IR7 371 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 CNOT6LQ96LI5 555 aaKnown RBP12.24□□□□□ -0.45
HSPG2-202ENST00000374676 GUCD1Q96NT3 240 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 TTPALQ9BTX7 342 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 VRTNQ9H8Y1 702 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 SAMSN1Q9NSI8 373 aaKnown RBP12.24□□□□□ -0.45
HSPG2-202ENST00000374676 GDAP2Q9NXN4 497 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 MTCH2Q9Y6C9 303 aa12.24□□□□□ -0.45
HSPG2-202ENST00000374676 SMTNL1A8MU46 457 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 KPNA7A9QM74 516 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 P4HA2O15460 535 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 VNN1O95497 513 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 CXCL14O95715 111 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 PRKCSHP14314 528 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-202ENST00000374676 TYMPP19971 482 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 EEF1GP26641 437 aaKnown RBP12.23□□□□□ -0.45
HSPG2-202ENST00000374676 GLUD2P49448 558 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 ZNF165P49910 485 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 MXI1P50539 228 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 KCNH2Q12809 1159 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 NCOA4Q13772 614 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 SMC1AQ14683 1233 aaKnown RBP12.23□□□□□ -0.45
HSPG2-202ENST00000374676 SGSM1Q2NKQ1 1148 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 DCAF17Q5H9S7 520 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-202ENST00000374676 CDKAL1Q5VV42 579 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 PDXDC1Q6P996 788 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 DSTYKQ6XUX3 929 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 MRPL43Q8N983 215 aaKnown RBP12.23□□□□□ -0.45
HSPG2-202ENST00000374676 APPL2Q8NEU8 664 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 MICAL1Q8TDZ2 1067 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 TAF4BQ92750 862 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 SENP8Q96LD8 212 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 TCF25Q9BQ70 676 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 RXFP1Q9HBX9 757 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 ENTPD7Q9NQZ7 604 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 FANCLQ9NW38 375 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 MAGEC2Q9UBF1 373 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-202ENST00000374676 PCDHB8Q9UN66 801 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 COQ4Q9Y3A0 265 aa12.23□□□□□ -0.45
HSPG2-202ENST00000374676 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.23□□□□□ -0.45
HSPG2-202ENST00000374676 I3L4J1 428 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 CYB561D2O14569 222 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 N4BP1O75113 896 aaKnown RBP12.22□□□□□ -0.45
HSPG2-202ENST00000374676 HLA-DRAP01903 254 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 CYP11A1P05108 521 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 URODP06132 367 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 FAM163BP0C2L3 166 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 IRS1P35568 1242 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 MTIF2P46199 727 aaKnown RBP12.22□□□□□ -0.45
HSPG2-202ENST00000374676 FMO5P49326 533 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 MYL6P60660 151 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 MRPL58Q14197 206 aaKnown RBP12.22□□□□□ -0.45
HSPG2-202ENST00000374676 IQCB1Q15051 598 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 PTPN14Q15678 1187 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 TCP11X2Q5H9J9 407 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 RTP2Q5QGT7 225 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 KIAA1841Q6NSI8 718 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 LRSAM1Q6UWE0 723 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 DPH6Q7L8W6 267 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 LIMS2Q7Z4I7 341 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 FBXL13Q8NEE6 735 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 LNX1Q8TBB1 728 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-202ENST00000374676 SPATA18Q8TC71 538 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 MYLIPQ8WY64 445 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 RIN2Q8WYP3 895 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-202ENST00000374676 PIK3R5Q8WYR1 880 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 XYLT2Q9H1B5 865 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.22□□□□□ -0.45
HSPG2-202ENST00000374676 MRPL17Q9NRX2 175 aaKnown RBP12.22□□□□□ -0.45
HSPG2-202ENST00000374676 FNIP2Q9P278 1114 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 DSEQ9UL01 958 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 CDH23Q9H251 3354 aa12.22□□□□□ -0.45
HSPG2-202ENST00000374676 MTCL1Q9Y4B5 1905 aaKnown RBP12.21□□□□□ -0.45
HSPG2-202ENST00000374676 C2orf71A6NGG8 1288 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 LRRC10BA6NIK2 292 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 HIDE1A8MVS5 230 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 KCNJ18B7U540 433 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 H7C4K7 107 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 TBC1D4O60343 1298 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 OAZ2O95190 189 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 C1RP00736 705 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 ASS1P00966 412 aaKnown RBP12.21□□□□□ -0.45
HSPG2-202ENST00000374676 AFPP02771 609 aaKnown RBP12.21□□□□□ -0.45
HSPG2-202ENST00000374676 ODC1P11926 461 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 ZNF18P17022 549 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 IGFBP4P22692 258 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 TKTP29401 623 aaKnown RBP12.21□□□□□ -0.45
HSPG2-202ENST00000374676 ZNF445P59923 1031 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 CREMQ03060 361 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 CETN1Q12798 172 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 KCNJ12Q14500 433 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms