RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 HLA-DPA1P20036 260 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 PDIA3P30101 505 aaKnown RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 HNRNPH2P55795 449 aaKnown RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 BADQ92934 168 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 MRFAP1Q9Y605 127 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 LAMTOR5O43504 91 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ANP32DO95626 131 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 WEE1P30291 646 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 EIF4A3P38919 411 aaKnown RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ELAVL2Q12926 359 aaKnown RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ORC2Q13416 577 aaPredicted RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 SLC12A1Q13621 1099 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 KCNA10Q16322 511 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ARMC6Q6NXE6 501 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 FRA10AC1Q70Z53 315 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 HORMAD1Q86X24 394 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 TTC8Q8TAM2 541 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 TUBGCP3Q96CW5 907 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 CYTH2Q99418 400 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 KIAA1586Q9HCI6 787 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 MYMKA6NI61 221 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 ENC1O14682 589 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 ZNF263O14978 683 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CALB1P05937 261 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CHRNA3P32297 505 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CACNB2Q08289 660 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 ITPRIPL1Q6GPH6 555 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 NT5DC4Q86YG4 428 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 RNF149Q8NC42 400 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CFAP36Q96G28 342 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 OSBPL1AQ9BXW6 950 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 BCO2Q9BYV7 579 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 GCNT4Q9P109 453 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 ZNF229Q9UJW7 825 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 TRAF3IP3Q9Y228 551 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 MEGF6O75095 1541 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 RPAP1Q9BWH6 1393 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 TARSL2A2RTX5 802 aaKnown RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 PRR23D1E9PI22 279 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CLDN3O15551 220 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 WDR47O94967 919 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 PRR23D2P0DMB1 279 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 MYBL1P10243 752 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 HOXA10P31260 410 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 DSG3P32926 999 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 NLRP11P59045 1033 aaKnown RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 EFCAB12Q6NXP0 572 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 RGS9BPQ6ZS82 235 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 EPM2AIP1Q7L775 607 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 PALB2Q86YC2 1186 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 PROM2Q8N271 834 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CMTM5Q96DZ9 223 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 KIF12Q96FN5 646 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 MFSD14AQ96MC6 490 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 NR1H4Q96RI1 486 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 NKX2-4Q9H2Z4 354 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 KDM4CQ9H3R0 1056 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 RCOR1Q9UKL0 485 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 RASA4BC9J798 803 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 RASA4O43374 803 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 MFAP3LO75121 409 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 SGPL1O95470 568 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 RANBP1P43487 201 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 HSPA13P48723 471 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 FMR1Q06787 632 aaKnown RBP eCLIP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 COL13A1Q5TAT6 717 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 TAF2Q6P1X5 1199 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 AGGF1Q8N302 714 aaeCLIP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 MCPH1Q8NEM0 835 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 DTX3LQ8TDB6 740 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 OTUD7AQ8TE49 926 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 AGBL1Q96MI9 1066 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 ACAP3Q96P50 834 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 SLC4A9Q96Q91 983 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 MOV10L1Q9BXT6 1211 aaKnown RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 FTHL17Q9BXU8 183 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 USP44Q9H0E7 712 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CCDC134Q9H6E4 229 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CEP72Q9P209 647 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 KIAA1024Q9UPX6 916 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 PYGMP11217 842 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 PSMC1P62191 440 aaKnown RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 DAB2P98082 770 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 PPARDQ03181 441 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CYLC2Q14093 348 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 SLC26A7Q8TE54 656 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 OSBP2Q969R2 916 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 PHF21AQ96BD5 680 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 THAP11Q96EK4 314 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 EML4Q9HC35 981 aaKnown RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 SPATA6Q9NWH7 488 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 GGT7Q9UJ14 662 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 SESN1Q9Y6P5 492 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 UBE4BO95155 1302 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 E7ENQ6 273 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 NCK2O43639 380 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 ASMTLO95671 621 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 KRT75O95678 551 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CFIP05156 583 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 APOA4P06727 396 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms