RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 SCARA5Q6ZMJ2 495 aa16.81■□□□□ 0.28
NIPAL3-204ENST00000374399 FAM126BQ8IXS8 530 aa16.81■□□□□ 0.28
NIPAL3-204ENST00000374399 SECISBP2LQ93073 1101 aaKnown RBP16.81■□□□□ 0.28
NIPAL3-204ENST00000374399 HPDLQ96IR7 371 aa16.81■□□□□ 0.28
NIPAL3-204ENST00000374399 FAXDC2Q96IV6 333 aa16.81■□□□□ 0.28
NIPAL3-204ENST00000374399 ZSWIM1Q9BR11 485 aa16.81■□□□□ 0.28
NIPAL3-204ENST00000374399 TRAIPQ9BWF2 469 aa16.81■□□□□ 0.28
NIPAL3-204ENST00000374399 L2HGDHQ9H9P8 463 aa16.81■□□□□ 0.28
NIPAL3-204ENST00000374399 PARP2Q9UGN5 583 aa16.81■□□□□ 0.28
NIPAL3-204ENST00000374399 INTUQ9ULD6 942 aa16.81■□□□□ 0.28
NIPAL3-204ENST00000374399 SQORQ9Y6N5 450 aa16.81■□□□□ 0.28
NIPAL3-204ENST00000374399 ANO9A1A5B4 782 aa16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 RIOK3O14730 519 aaKnown RBP16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 CD4P01730 458 aa16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 ATF7P17544 494 aaPredicted RBP16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 PDE6CP51160 858 aa16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 AFF1P51825 1210 aaKnown RBP16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 CDH8P55286 799 aa16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 RBP5P82980 135 aa16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 PAK2Q13177 524 aa16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 GPNMBQ14956 572 aa16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 ZNF667Q5HYK9 610 aa16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 MRPL10Q7Z7H8 261 aaKnown RBP16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 WHAMMQ8TF30 809 aa16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 ZFP42Q96MM3 310 aa16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 SMYD3Q9H7B4 428 aa16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 NXF1Q9UBU9 619 aaKnown RBP16.8■□□□□ 0.28
NIPAL3-204ENST00000374399 BUB1O43683 1085 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 H2AFZP0C0S5 128 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 CD58P19256 250 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 AGMOQ6ZNB7 445 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 H2AFVQ71UI9 128 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 LPPQ93052 612 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 PPP1R10Q96QC0 940 aaKnown RBP16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 CRISPLD2Q9H0B8 497 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 LUC7LQ9NQ29 371 aaKnown RBP16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 SEPT11Q9NVA2 429 aaKnown RBP16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 UBQLN1Q9UMX0 589 aaKnown RBP16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 PIRO00625 290 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 ZNF623O75123 536 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 GZMAP12544 262 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 UNGP13051 313 aaPredicted RBP16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 C9orf57Q5W0N0 161 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 RTN4RL1Q86UN2 441 aaPredicted RBP16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 RNF10Q8N5U6 811 aaKnown RBP16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 ARHGEF26Q96DR7 871 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 TWNKQ96RR1 684 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 MIOSQ9NXC5 875 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 HMGXB4Q9UGU5 601 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 NCANO14594 1321 aa16.79■□□□□ 0.28
NIPAL3-204ENST00000374399 FTLP02792 175 aaPredicted RBP16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 CYP1A1P04798 512 aaPredicted RBP16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 TMEM253P0C7T8 217 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 HSPA8P11142 646 aaKnown RBP16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 IGFBP6P24592 240 aaPredicted RBP16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 BPIFB4P59827 614 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 AMPD2Q01433 879 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 CLEC16AQ2KHT3 1053 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 SMYD5Q6GMV2 418 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 ZNF677Q86XU0 584 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 USP38Q8NB14 1042 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 BEST2Q8NFU1 509 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 LINC01599Q8WXQ3 324 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 ZNF333Q96JL9 665 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 TSPAN18Q96SJ8 248 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 THAP2Q9H0W7 228 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 GOLGA2P5Q9HBQ8 144 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 PCDHGC5Q9Y5F6 944 aa16.78■□□□□ 0.28
NIPAL3-204ENST00000374399 A0A0U1RQF3 1178 aa16.77■□□□□ 0.28
NIPAL3-204ENST00000374399 RTN2O75298 545 aa16.77■□□□□ 0.28
NIPAL3-204ENST00000374399 CLSTN1O94985 981 aa16.77■□□□□ 0.28
NIPAL3-204ENST00000374399 ATP1A1P05023 1023 aaKnown RBP16.77■□□□□ 0.28
NIPAL3-204ENST00000374399 GNA15P30679 374 aa16.77■□□□□ 0.28
NIPAL3-204ENST00000374399 TXLNBQ8N3L3 684 aa16.77■□□□□ 0.28
NIPAL3-204ENST00000374399 TFAP2BQ92481 460 aa16.77■□□□□ 0.28
NIPAL3-204ENST00000374399 ADAM2Q99965 735 aa16.77■□□□□ 0.28
NIPAL3-204ENST00000374399 SEZ6LQ9BYH1 1024 aa16.77■□□□□ 0.28
NIPAL3-204ENST00000374399 NME7Q9Y5B8 376 aa16.77■□□□□ 0.28
NIPAL3-204ENST00000374399 TET1Q8NFU7 2136 aa16.77■□□□□ 0.27
NIPAL3-204ENST00000374399 A0A0A6YYK5 440 aaPredicted RBP16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 GRID2IPA4D2P6 1211 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 ANKRD62A6NC57 917 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 ENC1O14682 589 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 SPTLC1O15269 473 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 CILPO75339 1184 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 ITGA4P13612 1032 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 CYP3A5P20815 502 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 SSTR3P32745 418 aaPredicted RBP16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 MLH1P40692 756 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 RAD23BP54727 409 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 ZNF394Q53GI3 561 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 ZNF598Q86UK7 904 aaKnown RBP16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 LRRC52Q8N7C0 313 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 TRIM58Q8NG06 486 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 ZNF606Q8WXB4 792 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 NOX5Q96PH1 765 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 GAD1Q99259 594 aa16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 NAPGQ99747 312 aaPredicted RBP16.76■□□□□ 0.27
NIPAL3-204ENST00000374399 ELOVL4Q9GZR5 314 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms