RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 C2orf54Q08AI8 447 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 SHHQ15465 462 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 IFI16Q16666 785 aaKnown RBP15.29■□□□□ 0.04
HMGA1-203ENST00000374116 AMHR2Q16671 573 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 RPUSD2Q8IZ73 545 aaKnown RBP15.29■□□□□ 0.04
HMGA1-203ENST00000374116 SYCP3Q8IZU3 236 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 SPATA4Q8NEY3 305 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 LINC01599Q8WXQ3 324 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 GDF15Q99988 308 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 UBE2OQ9C0C9 1292 aaKnown RBP15.29■□□□□ 0.04
HMGA1-203ENST00000374116 C17orf75Q9HAS0 396 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 TISP43B9A030 160 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 MAPK13O15264 365 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 PALMO75781 387 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 GFPT2O94808 682 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 FGBP02675 491 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 RFC2P35250 354 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 STAT1P42224 750 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 CYP2J2P51589 502 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 MAPK6Q16659 721 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 TMEM132AQ24JP5 1023 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 SPIRE2Q8WWL2 714 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 SEPT8Q92599 483 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 ADAM2Q99965 735 aa15.29■□□□□ 0.04
HMGA1-203ENST00000374116 NCK2O43639 380 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 MNAT1P51948 309 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 DEFB103AP81534 67 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 POU5F1BQ06416 359 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 BFSP1Q12934 665 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 CFAP221Q4G0U5 840 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 MEI1Q5TIA1 1274 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 FAM117BQ6P1L5 589 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 CNKSR3Q6P9H4 555 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 IFNLR1Q8IU57 520 aaPredicted RBP15.28■□□□□ 0.04
HMGA1-203ENST00000374116 KCNN1Q92952 543 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 HVCN1Q96D96 273 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 ZBTB45Q96K62 511 aaPredicted RBP15.28■□□□□ 0.04
HMGA1-203ENST00000374116 TARS2Q9BW92 718 aaKnown RBP15.28■□□□□ 0.04
HMGA1-203ENST00000374116 EIF2AQ9BY44 585 aaKnown RBP15.28■□□□□ 0.04
HMGA1-203ENST00000374116 NFKBIZQ9BYH8 718 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 STK33Q9BYT3 514 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 C2orf40Q9H1Z8 148 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 FZD8Q9H461 694 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 NAGPAQ9UK23 515 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 AJAP1Q9UKB5 411 aaPredicted RBP15.28■□□□□ 0.04
HMGA1-203ENST00000374116 INTUQ9ULD6 942 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 NENFQ9UMX5 172 aa15.28■□□□□ 0.04
HMGA1-203ENST00000374116 MICAL3Q7RTP6 2002 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.27■□□□□ 0.04
HMGA1-203ENST00000374116 EXOC3O60645 756 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 UPP2O95045 317 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 FSBPO95073 299 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 PARNO95453 639 aaKnown RBP15.27■□□□□ 0.04
HMGA1-203ENST00000374116 PRPF4BQ13523 1007 aaKnown RBP15.27■□□□□ 0.04
HMGA1-203ENST00000374116 IKBKEQ14164 716 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 CBWD6Q4V339 395 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 CBWD3Q5JTY5 395 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 CBWD5Q5RIA9 395 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 EEF1DP3Q658K8 133 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 TWF2Q6IBS0 349 aaKnown RBP15.27■□□□□ 0.04
HMGA1-203ENST00000374116 ALKBH5Q6P6C2 394 aaKnown RBP15.27■□□□□ 0.04
HMGA1-203ENST00000374116 CCNI2Q6ZMN8 369 aaPredicted RBP15.27■□□□□ 0.04
HMGA1-203ENST00000374116 USP38Q8NB14 1042 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 LMO3Q8TAP4 145 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 FAM76AQ8TAV0 307 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 PACSIN1Q9BY11 444 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 TBX20Q9UMR3 447 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 HES2Q9Y543 173 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 SQORQ9Y6N5 450 aa15.27■□□□□ 0.04
HMGA1-203ENST00000374116 GRID2IPA4D2P6 1211 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 TMCO5BA8MYB1 307 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 ENPP3O14638 875 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 KRT13P13646 458 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 RFX1P22670 979 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 CXCR5P32302 372 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 SOX5P35711 763 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 IRAK1P51617 712 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 GLE1Q53GS7 698 aaKnown RBP15.27■□□□□ 0.03
HMGA1-203ENST00000374116 C1orf220Q5T0J3 134 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 MAP4K3Q8IVH8 894 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 RNF169Q8NCN4 708 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 BICD1Q96G01 975 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 CABS1Q96KC9 395 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 CBWD1Q9BRT8 395 aa15.27■□□□□ 0.03
HMGA1-203ENST00000374116 PRMT7Q9NVM4 692 aaPredicted RBP15.27■□□□□ 0.03
HMGA1-203ENST00000374116 MEIS3P2A8K0S8 358 aa15.26■□□□□ 0.03
HMGA1-203ENST00000374116 ANKRD65E5RJM6 399 aa15.26■□□□□ 0.03
HMGA1-203ENST00000374116 ACKR2O00590 384 aa15.26■□□□□ 0.03
HMGA1-203ENST00000374116 CES2O00748 559 aa15.26■□□□□ 0.03
HMGA1-203ENST00000374116 PMM2O15305 246 aa15.26■□□□□ 0.03
HMGA1-203ENST00000374116 EIF3HO15372 352 aaKnown RBP eCLIP15.26■□□□□ 0.03
HMGA1-203ENST00000374116 HARSP12081 509 aaKnown RBP15.26■□□□□ 0.03
HMGA1-203ENST00000374116 ADSSP30520 456 aa15.26■□□□□ 0.03
HMGA1-203ENST00000374116 FNTAP49354 379 aa15.26■□□□□ 0.03
HMGA1-203ENST00000374116 EFNA5P52803 228 aa15.26■□□□□ 0.03
HMGA1-203ENST00000374116 WDR5P61964 334 aaKnown RBP15.26■□□□□ 0.03
HMGA1-203ENST00000374116 MYL7Q01449 175 aa15.26■□□□□ 0.03
HMGA1-203ENST00000374116 STRN3Q13033 797 aa15.26■□□□□ 0.03
HMGA1-203ENST00000374116 SEZ6Q53EL9 994 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms