RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 MAP1SQ66K74 1059 aaPredicted RBP12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 HIBCHQ6NVY1 386 aaPredicted RBP12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 CATSPERGQ6ZRH7 1159 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 ATL2Q8NHH9 583 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 SNF8Q96H20 258 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 GMLQ99445 158 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 ZNF662Q6ZS27 426 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 MCOLN2Q8IZK6 566 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 CHST13Q8NET6 341 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 GIMAP7Q8NHV1 300 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 FBF1Q8TES7 1133 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 ZNF606Q8WXB4 792 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 SENP7Q9BQF6 1050 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 PDGFCQ9NRA1 345 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 IP6K2Q9UHH9 426 aa12.5□□□□□ -0.41
PACSIN1-202ENST00000374043 CST8O60676 142 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 LCA5LO95447 670 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 MAPTP10636 758 aaKnown RBP12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 MUTP22033 750 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 EFNA5P52803 228 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 PTENP60484 403 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 CLEC16AQ2KHT3 1053 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 C9orf131Q5VYM1 1079 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 TADA2BQ86TJ2 420 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 FEZF2Q8TBJ5 459 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 AFG1LQ8WV93 481 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 FAM81BQ96LP2 452 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 SMC6Q96SB8 1091 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 GPATCH2LQ9NWQ4 482 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 NUB1Q9Y5A7 615 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 MRPL42Q9Y6G3 142 aaKnown RBP12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 A0A087WUV0 522 aaPredicted RBP12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 F8VP50 259 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 CALB1P05937 261 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 GARTP22102 1010 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 NAMPTP43490 491 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 HIRAP54198 1017 aaPredicted RBP12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 RPL7AP62424 266 aaKnown RBP12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 TMC3Q7Z5M5 1100 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 KCTD17Q8N5Z5 321 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 PRELID2Q8N945 189 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 TMEM121Q9BTD3 319 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 NIF3L1Q9GZT8 377 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 EPN3Q9H201 632 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 GPRC5DQ9NZD1 345 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 ZMYM2Q9UBW7 1377 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 A0A0A6YYK5 440 aaPredicted RBP12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 MED7O43513 233 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 MYL3P08590 195 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 LCP1P13796 627 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 MMP14P50281 582 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 ERFP50548 548 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 FAM71AQ8IYT1 594 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 CAVIN3Q969G5 261 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 OPTNQ96CV9 577 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 KLRG1Q96E93 195 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 METTL5Q9NRN9 209 aaKnown RBP12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 KLHL14Q9P2G3 628 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 ATRNL1Q5VV63 1379 aa12.49□□□□□ -0.41
PACSIN1-202ENST00000374043 A6NJR5 290 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 DCDC2CA8MYV0 355 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 TCP11X1B4DZS4 312 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 TOM1L1O75674 476 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 GZMAP12544 262 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 KIF22Q14807 665 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 SGSM1Q2NKQ1 1148 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 ZNF449Q6P9G9 518 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 LRRC57Q8N9N7 239 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 RBM41Q96IZ5 413 aaKnown RBP12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 SNX25Q9H3E2 840 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 XPNPEP1Q9NQW7 623 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 PSD3Q9NYI0 1048 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 ADGRA3Q8IWK6 1321 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 PLCH1Q4KWH8 1693 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 ETS1P14921 441 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 PDGFRAP16234 1089 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 PTGISQ16647 500 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 TWF2Q6IBS0 349 aaKnown RBP12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 EFCAB13Q8IY85 973 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 ANKRD13AQ8IZ07 590 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 TMC2Q8TDI7 906 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 SHC3Q92529 594 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 FERMT1Q9BQL6 677 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 CTNNAL1Q9UBT7 734 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 A8MXQ7 604 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 OGTO15294 1046 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 CTSHP09668 335 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 RARBP10826 455 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 INSRRP14616 1297 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 MAN1A1P33908 653 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 GCLCP48506 637 aaPredicted RBP12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 JAM2P57087 298 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 SP2Q02086 613 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 MYO1EQ12965 1108 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 MXD4Q14582 209 aaPredicted RBP12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 CCDC6Q16204 474 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 XRRA1Q6P2D8 792 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 NIPA1Q7RTP0 329 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 HES6Q96HZ4 224 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 DNAI2Q9GZS0 605 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms