RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 FAM162AQ96A26 154 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 TBCCD1Q9NVR7 557 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 COL17A1Q9UMD9 1497 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 NPTXRO95502 500 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 TAP1Q03518 808 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 DLG1Q12959 904 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 G2E3Q7L622 706 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 BLIDQ8IZY5 108 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 TUBGCP5Q96RT8 1024 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 NUDT12Q9BQG2 462 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 DCUN1D5Q9BTE7 237 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 SORCS3Q9UPU3 1222 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 V9GY48 417 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 MDM4O15151 490 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 PHF2O75151 1096 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 ZNF23P17027 643 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 SLC9A3P48764 834 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 CYP27A1Q02318 531 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 ZNF827Q17R98 1081 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 KIAA1755Q5JYT7 1200 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 IFNL2Q8IZJ0 200 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 LINC00301Q8NCQ3 95 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 GDPD5Q8WTR4 605 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 HSPH1Q92598 858 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 ZNF285Q96NJ3 590 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 STK33Q9BYT3 514 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 VPS33BQ9H267 617 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 GPN3Q9UHW5 284 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 FIS1Q9Y3D6 152 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 M0QX08 132 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 GSPT2Q8IYD1 628 aaKnown RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 TMEM161AQ9NX61 479 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 TNPO2O14787 897 aaKnown RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 SYNCRIPO60506 623 aaKnown RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 NOL4O94818 638 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 MBD4O95243 580 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 BTN3A2P78410 334 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 GPS1Q13098 491 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 LBRQ14739 615 aaKnown RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 SLC9A4Q6AI14 798 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 PACS1Q6VY07 963 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 LRRC6Q86X45 466 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 CAVIN3Q969G5 261 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 MAN1B1Q9UKM7 699 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 PLCG1P19174 1290 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 RPS6P62753 249 aaKnown RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 MCL1Q07820 350 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 P3H1Q32P28 736 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 CCDC81Q6ZN84 652 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 TMPRSS6Q8IU80 811 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 K7ENM7 598 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 SLC1A1P43005 524 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 PTDSS1P48651 473 aaKnown RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 EIF4A2Q14240 407 aaKnown RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 SPDYCQ5MJ68 293 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 RESP18Q5W5W9 173 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 TRIM72Q6ZMU5 477 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 SH2D3CQ8N5H7 860 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 PDLIM1O00151 329 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 ZC3H11AO75152 810 aaKnown RBP eCLIP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 THRAP10827 490 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 EIF6P56537 245 aaKnown RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 DDR2Q16832 855 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 IMPG1Q17R60 797 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 KYQ8NBH2 561 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 HAVCR1Q96D42 359 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 RNF26Q9BY78 433 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 H2AFY2Q9P0M6 372 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 A0A1W2PQ72 361 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 SFI1A8K8P3 1242 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 KPNA3O00505 521 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-206ENST00000373388 CIITAP33076 1130 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 NEK5Q6P3R8 708 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 ERICH1Q86X53 443 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 TTC30BQ8N4P2 665 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 CITED4Q96RK1 184 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 CAB39LQ9H9S4 337 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 VPS4AQ9UN37 437 aa7.34□□□□□ -1.23
CSMD2-206ENST00000373388 IFNA7P01567 189 aa7.34□□□□□ -1.24
CSMD2-206ENST00000373388 CCNA2P20248 432 aa7.34□□□□□ -1.24
CSMD2-206ENST00000373388 TYK2P29597 1187 aa7.34□□□□□ -1.24
CSMD2-206ENST00000373388 CDC73Q6P1J9 531 aa7.34□□□□□ -1.24
CSMD2-206ENST00000373388 GET4Q7L5D6 327 aaPredicted RBP7.34□□□□□ -1.24
CSMD2-206ENST00000373388 MYO1GB0I1T2 1018 aa7.34□□□□□ -1.24
CSMD2-206ENST00000373388 ABATP80404 500 aa7.34□□□□□ -1.24
CSMD2-206ENST00000373388 ARHGEF16Q5VV41 709 aa7.34□□□□□ -1.24
CSMD2-206ENST00000373388 E4F1Q66K89 784 aaPredicted RBP7.34□□□□□ -1.24
CSMD2-206ENST00000373388 XKRXQ6PP77 449 aa7.34□□□□□ -1.24
CSMD2-206ENST00000373388 DPP10Q8N608 796 aa7.34□□□□□ -1.24
CSMD2-206ENST00000373388 CALN1Q9BXU9 219 aa7.34□□□□□ -1.24
CSMD2-206ENST00000373388 PABPC3Q9H361 631 aaKnown RBP7.34□□□□□ -1.24
CSMD2-206ENST00000373388 ATP8A2Q9NTI2 1148 aa7.34□□□□□ -1.24
CSMD2-206ENST00000373388 CITO14578 2027 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 NOTOA8MTQ0 251 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 GPAA1O43292 621 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 PLA2G4AP47712 749 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 BROXQ5VW32 411 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 RNFT2Q96EX2 444 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 GRIP2Q9C0E4 1043 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms