RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 SLC8A3P57103 927 aa18.7■□□□□ 0.58
TRAF3IP1-201ENST00000373327 DNAJC3Q13217 504 aa18.7■□□□□ 0.58
TRAF3IP1-201ENST00000373327 ZBTB41Q5SVQ8 909 aa18.7■□□□□ 0.58
TRAF3IP1-201ENST00000373327 KIAA1683Q9H0B3 1180 aa18.7■□□□□ 0.58
TRAF3IP1-201ENST00000373327 A6NJR5 290 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 MARSP56192 900 aaKnown RBP18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 GJC2Q5T442 439 aaPredicted RBP18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 RBAK-RBAKDNI3L0D1 243 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 ENOSF1Q7L5Y1 443 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 FAM83AQ86UY5 434 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CHMP2BQ9UQN3 213 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 USP54Q70EL1 1684 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CCDC78A2IDD5 438 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 PLSCR1O15162 318 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CALB1P05937 261 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 SUPT20HL2P0C7V6 817 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 MOB2Q70IA6 237 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 LRRC57Q8N9N7 239 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 OR5B17Q8NGF7 314 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 MICAL1Q8TDZ2 1067 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 MAML1Q92585 1016 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 HES6Q96HZ4 224 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 RSRC1Q96IZ7 334 aaKnown RBP18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 TRAIPQ9BWF2 469 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 MAGEA4P43358 317 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 EFCAB12Q6NXP0 572 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 FEZF2Q8TBJ5 459 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 GPATCH2LQ9NWQ4 482 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 SNX9Q9Y5X1 595 aa18.69■□□□□ 0.58
TRAF3IP1-201ENST00000373327 I3L4J1 428 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 P4HA2O15460 535 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 IREB2P48200 963 aaKnown RBP18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CFAP157Q5JU67 520 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 MCOLN2Q8IZK6 566 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 ZNF526Q8TF50 670 aaPredicted RBP18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 KLC4Q9NSK0 619 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 COL4A1P02462 1669 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 ITGB3P05106 788 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 TNFSF9P41273 254 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 NUMBP49757 651 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 GPRASP2Q96D09 838 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 KIF12Q96FN5 646 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 DDX20Q9UHI6 824 aaKnown RBP18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CACNA1SQ13698 1873 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 GZMAP12544 262 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CLEC16AQ2KHT3 1053 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CEP120Q8N960 986 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 ASAP3Q8TDY4 903 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 COPS5Q92905 334 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 ETNK1Q9HBU6 452 aa18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 METTL5Q9NRN9 209 aaKnown RBP18.68■□□□□ 0.58
TRAF3IP1-201ENST00000373327 F8VP50 259 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 HNRNPH1P31943 449 aaKnown RBP18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 BMT2Q1RMZ1 405 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 FAM71DQ8N9W8 422 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 STMN2Q93045 179 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 ATXN7L3BQ96GX2 97 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 TRABDQ9H4I3 376 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 MED7O43513 233 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 AGTP01019 485 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 RPL7AP62424 266 aaKnown RBP18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 AGBL2Q5U5Z8 902 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CCDC62Q6P9F0 684 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CEP128Q6ZU80 1094 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 MAP7D3Q8IWC1 876 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 MMP19Q99542 508 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 SMYD2Q9NRG4 433 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 FAM53CQ9NYF3 392 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CPP00450 1065 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CXCL8P10145 99 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 EIF3EP60228 445 aaKnown RBP18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 VSIG10LQ86VR7 867 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 APOBEC3FQ8IUX4 373 aaKnown RBP18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CPB2Q96IY4 423 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 DNAI2Q9GZS0 605 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 UBIAD1Q9Y5Z9 338 aa18.67■□□□□ 0.58
TRAF3IP1-201ENST00000373327 KIAA0391O15091 583 aaKnown RBP18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 ZNF862O60290 1169 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 VTNP04004 478 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 PDGFRAP16234 1089 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 ITIH2P19823 946 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 OVGP1Q12889 678 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 HIF1AQ16665 826 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 ZNF606Q8WXB4 792 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 DHX35Q9H5Z1 703 aaKnown RBP18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 CISHQ9NSE2 258 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 POLIQ9UNA4 740 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 MRPL42Q9Y6G3 142 aaKnown RBP18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 DDNO94850 711 aaPredicted RBP18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 ARL1P40616 181 aaPredicted RBP18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 PDE1BQ01064 536 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 C6orf163Q5TEZ5 329 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 SLC10A4Q96EP9 437 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 RPS6KC1Q96S38 1066 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 APRTP07741 180 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 KIF22Q14807 665 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 TMEM132BQ14DG7 1078 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 ATF7IP2Q5U623 682 aa18.66■□□□□ 0.58
TRAF3IP1-201ENST00000373327 MAP4K3Q8IVH8 894 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms