RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 SNX25Q9H3E2 840 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 KNL1Q8NG31 2342 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 FGGP02679 453 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 FGRP09769 529 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 TMOD1P28289 359 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 ZBED6P86452 979 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 IRGCQ6NXR0 463 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 TRIM67Q6ZTA4 783 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 CCDC149Q6ZUS6 474 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 OR9Q1Q8NGQ5 310 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 PNKPQ96T60 521 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 RMDN3Q96TC7 470 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 DAPK2Q9UIK4 370 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 PCDHB13Q9Y5F0 798 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 ATF7P17544 494 aaPredicted RBP6.93□□□□□ -1.3
CHD6-203ENST00000373233 CDC25CP30307 473 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 GABPAQ06546 454 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 SPP2Q13103 211 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 MIS18BP1Q6P0N0 1132 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 POTEGQ6S5H5 508 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 LDHDQ86WU2 507 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 MRPL40Q9NQ50 206 aaKnown RBP6.93□□□□□ -1.3
CHD6-203ENST00000373233 PRR12Q9ULL5 1215 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 DLEC1Q9Y238 1755 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 BAIAP3O94812 1187 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 OTUD4Q01804 1114 aaKnown RBP6.93□□□□□ -1.3
CHD6-203ENST00000373233 PPIDQ08752 370 aaKnown RBP6.93□□□□□ -1.3
CHD6-203ENST00000373233 COASYQ13057 564 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 TSHZ1Q6ZSZ6 1077 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 UNC13DQ70J99 1090 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 TAS2R42Q7RTR8 314 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 ANKFY1Q9P2R3 1169 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 APOBEC2Q9Y235 224 aaKnown RBP6.93□□□□□ -1.3
CHD6-203ENST00000373233 GDAQ9Y2T3 454 aa6.93□□□□□ -1.3
CHD6-203ENST00000373233 SLC26A4O43511 780 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 PRPF6O94906 941 aaKnown RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 ITIH4Q14624 930 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 SLC51AQ86UW1 340 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 GLG1Q92896 1179 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 EME1Q96AY2 570 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 AP1M1Q9BXS5 423 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ZWILCHQ9H900 591 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 IDH3BO43837 385 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ATP9AO75110 1047 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ZNF18P17022 549 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 TUFMP49411 452 aaKnown RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 JAK3P52333 1124 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 SEC24CP53992 1094 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 CXCL9Q07325 125 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 HIC1Q14526 733 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 PPP2R5DQ14738 602 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 TTC33Q6PID6 262 aaPredicted RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 RASGRP2Q7LDG7 609 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 CDAN1Q8IWY9 1227 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ANKRD36BP1Q96IX9 119 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 NHEJ1Q9H9Q4 299 aaPredicted RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 GALNT8Q9NY28 637 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 RP1L1Q8IWN7 2480 aaPredicted RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 PSAPP07602 524 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ODR4Q5SWX8 454 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 PEX5LQ8IYB4 626 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 CDHR1Q96JP9 859 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 TELO2Q9Y4R8 837 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 GOLGA8JA6NMD2 632 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 BCRP11274 1271 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 CCNA1P78396 465 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 CROCCP3Q8IVE0 287 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 SLC17A8Q8NDX2 589 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ACER1Q8TDN7 264 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 PHF21AQ96BD5 680 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 B3GALT6Q96L58 329 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 GINM1Q9NU53 330 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 KIF17Q9P2E2 1029 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 POLR2AP24928 1970 aaKnown RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 F8VZ95 297 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 EIF4A3P38919 411 aaKnown RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 RGS2P41220 211 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 CASP5P51878 434 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 C21orf59P57076 290 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 LRRC41Q15345 812 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ATL2Q8NHH9 583 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 SLC5A4Q9NY91 659 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 NID2Q14112 1375 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 USP4Q13107 963 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 MAPK11Q15759 364 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 LRRC49Q8IUZ0 686 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ENGASEQ8NFI3 743 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ZC3H15Q8WU90 426 aaKnown RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 ACAP3Q96P50 834 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 CCSER1Q9C0I3 900 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 RIOX1Q9H6W3 641 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 SAMSN1Q9NSI8 373 aaKnown RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 ABHD10Q9NUJ1 306 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 PNMA3Q9UL41 463 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 GPC4O75487 556 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 CDH3P22223 829 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 SLC12A2P55011 1212 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 IZUMO2Q6UXV1 221 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 FAM83AQ86UY5 434 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms