RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 ZNF473Q8WTR7 871 aaKnown RBP6.82□□□□□ -1.32
CHD6-202ENST00000373222 LMBR1Q8WVP7 490 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 CPA5Q8WXQ8 436 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 SEC14L1Q92503 715 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 ZNF516Q92618 1163 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 ZDHHC16Q969W1 377 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 ZNF653Q96CK0 615 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 CCT8L2Q96SF2 557 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 FMO2Q99518 471 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 ZSWIM1Q9BR11 485 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 FAM213AQ9BRX8 229 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 ERP44Q9BS26 406 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 HAPLN2Q9GZV7 340 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 R3HDMLQ9H3Y0 253 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 XPNPEP1Q9NQW7 623 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 TBX20Q9UMR3 447 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 UTP11Q9Y3A2 253 aaKnown RBP6.82□□□□□ -1.32
CHD6-202ENST00000373222 DAAM1Q9Y4D1 1078 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 CTDP1Q9Y5B0 961 aaPredicted RBP6.82□□□□□ -1.32
CHD6-202ENST00000373222 UBE4BO95155 1302 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 UMODL1Q5DID0 1318 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 CCDC188H7C350 402 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 TP73O15350 636 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 GRIN3BO60391 1043 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 RARAP10276 462 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 KRT5P13647 590 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 CYP11B1P15538 503 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 CREB1P16220 341 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 MAGEA9P43362 315 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 ACOT2P49753 483 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 VPS41P49754 854 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 HMGCS2P54868 508 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 NCKAP1LP55160 1127 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 SP2Q02086 613 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 SQSTM1Q13501 440 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 SLC29A2Q14542 456 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 SIX1Q15475 284 aaPredicted RBP6.82□□□□□ -1.32
CHD6-202ENST00000373222 ARHGEF16Q5VV41 709 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 STXBP4Q6ZWJ1 553 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 SV2AQ7L0J3 742 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 ANKS1BQ7Z6G8 1248 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 NLRP14Q86W24 1093 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 CCDC25Q86WR0 208 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 TTC30BQ8N4P2 665 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 ZNF564Q8TBZ8 553 aaPredicted RBP6.82□□□□□ -1.32
CHD6-202ENST00000373222 EPS8L3Q8TE67 593 aaKnown RBP6.82□□□□□ -1.32
CHD6-202ENST00000373222 DDX1Q92499 740 aaKnown RBP6.82□□□□□ -1.32
CHD6-202ENST00000373222 CD101Q93033 1021 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 ZBED3Q96IU2 234 aaPredicted RBP6.82□□□□□ -1.32
CHD6-202ENST00000373222 CEP170P1Q96L14 293 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 TRIM55Q9BYV6 548 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 TXLNGYQ9BZA5 131 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 EPN3Q9H201 632 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 CARD9Q9H257 536 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 SLITRK6Q9H5Y7 841 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 EHMT1Q9H9B1 1298 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 KLHL11Q9NVR0 708 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 KCND2Q9NZV8 630 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 ZNRF3Q9ULT6 936 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 PCDHA3Q9Y5H8 950 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 EVPLQ92817 2033 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 LAMA3Q16787 3333 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 LAMA2P24043 3122 aaKnown RBP6.81□□□□□ -1.32
CHD6-202ENST00000373222 C3orf80F5H4A9 247 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 VWA5AO00534 786 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 HNRNPDLO14979 420 aaKnown RBP6.81□□□□□ -1.32
CHD6-202ENST00000373222 SPOPO43791 374 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 ATP2C2O75185 946 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 STBD1O95210 358 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 TCF4P15884 667 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 GJC1P36383 396 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 PSMC4P43686 418 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 GPC5P78333 572 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 IFT88Q13099 833 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 C6orf132Q5T0Z8 1188 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 SNRNP48Q6IEG0 339 aaKnown RBP6.81□□□□□ -1.32
CHD6-202ENST00000373222 CCDC137Q6PK04 289 aaKnown RBP6.81□□□□□ -1.32
CHD6-202ENST00000373222 TADA2BQ86TJ2 420 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 NIM1KQ8IY84 436 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 SUPT20HQ8NEM7 779 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 CCDC26Q8TAB7 109 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 SHC3Q92529 594 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 TMEM143Q96AN5 459 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 ZNF668Q96K58 619 aaPredicted RBP6.81□□□□□ -1.32
CHD6-202ENST00000373222 DMRTB1Q96MA1 342 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 CAMKK2Q96RR4 588 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 FAM129BQ96TA1 746 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 DDX23Q9BUQ8 820 aaKnown RBP6.81□□□□□ -1.32
CHD6-202ENST00000373222 MUC3BQ9H195 1237 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 KMT5AQ9NQR1 393 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 CHST7Q9NS84 486 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 RNF146Q9NTX7 359 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 DBR1Q9UK59 544 aaKnown RBP6.81□□□□□ -1.32
CHD6-202ENST00000373222 MRPS23Q9Y3D9 190 aaKnown RBP6.81□□□□□ -1.32
CHD6-202ENST00000373222 WDR46O15213 610 aaKnown RBP6.81□□□□□ -1.32
CHD6-202ENST00000373222 FZD6O60353 706 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 PLA2G6O60733 806 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 RTN2O75298 545 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 NR3C2P08235 984 aa6.81□□□□□ -1.32
CHD6-202ENST00000373222 NLRP11P59045 1033 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms