RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 PSAPP07602 524 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 POTEJP0CG39 1038 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 ALADP13716 330 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 TNNI1P19237 187 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 KCNJ2P63252 427 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 ARHGEF18Q6ZSZ5 1173 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 PASD1Q8IV76 773 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 FITM2Q8N6M3 262 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 IFT74Q96LB3 600 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 C9orf72Q96LT7 481 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 TGS1Q96RS0 853 aaKnown RBP13.52□□□□□ -0.24
CTPS1-202ENST00000372621 RPAP3Q9H6T3 665 aaPredicted RBP13.52□□□□□ -0.24
CTPS1-202ENST00000372621 TBK1Q9UHD2 729 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 NQO1P15559 274 aaKnown RBP13.52□□□□□ -0.24
CTPS1-202ENST00000372621 CD58P19256 250 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 GNA15P30679 374 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 LIG4P49917 911 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 IRX3P78415 501 aaPredicted RBP13.52□□□□□ -0.24
CTPS1-202ENST00000372621 PRKCEQ02156 737 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.24
CTPS1-202ENST00000372621 MGAT5Q09328 741 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 MTMR2Q13614 643 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 CEP57Q86XR8 500 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 RIBC1Q8N443 379 aaPredicted RBP13.52□□□□□ -0.24
CTPS1-202ENST00000372621 TCP11Q8WWU5 503 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 FNBP1Q96RU3 617 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 PLCD4Q9BRC7 762 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 ECT2Q9H8V3 914 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 RXFP1Q9HBX9 757 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 RNF146Q9NTX7 359 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 SEPT9Q9UHD8 586 aaPredicted RBP13.52□□□□□ -0.24
CTPS1-202ENST00000372621 AGO2Q9UKV8 859 aaKnown RBP13.52□□□□□ -0.24
CTPS1-202ENST00000372621 SCINQ9Y6U3 715 aa13.52□□□□□ -0.24
CTPS1-202ENST00000372621 LIASO43766 372 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 PIGRP01833 764 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 MAGEA4P43358 317 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 ACOT2P49753 483 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 COPS2P61201 443 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 MTFR1Q15390 333 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 P3H1Q32P28 736 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 MIS18BP1Q6P0N0 1132 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 DRICH1Q6PGQ1 229 aaPredicted RBP13.52□□□□□ -0.25
CTPS1-202ENST00000372621 TMEM270Q6UE05 265 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 SEPT14Q6ZU15 432 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 ASRGL1Q7L266 308 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 SRRM1Q8IYB3 904 aaKnown RBP13.52□□□□□ -0.25
CTPS1-202ENST00000372621 REPS2Q8NFH8 660 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 ATG4CQ96DT6 458 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 RBM15Q96T37 977 aaKnown RBP eCLIP13.52□□□□□ -0.25
CTPS1-202ENST00000372621 JPH1Q9HDC5 661 aaPredicted RBP13.52□□□□□ -0.25
CTPS1-202ENST00000372621 GINM1Q9NU53 330 aa13.52□□□□□ -0.25
CTPS1-202ENST00000372621 TLR3O15455 904 aaKnown RBP13.51□□□□□ -0.25
CTPS1-202ENST00000372621 TAC1P20366 129 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 NFX1Q12986 1120 aaKnown RBP13.51□□□□□ -0.25
CTPS1-202ENST00000372621 ANKLE1Q8NAG6 615 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 GLIS1Q8NBF1 620 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 FEZF2Q8TBJ5 459 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 RMDN2Q96LZ7 410 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 ZNRF3Q9ULT6 936 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 PCDHB4Q9Y5E5 795 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 CLTAP09496 248 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 LCTP09848 1927 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 FOXN2P32314 431 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 STX2P32856 288 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 ACVR2BQ13705 512 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 RNF43Q68DV7 783 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 PPP1R21Q6ZMI0 780 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 TTLL6Q8N841 843 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 CCDC77Q9BR77 488 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 TNS1Q9HBL0 1735 aaKnown RBP13.51□□□□□ -0.25
CTPS1-202ENST00000372621 ARHGEF3Q9NR81 526 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 SLC9A2Q9UBY0 812 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 NUB1Q9Y5A7 615 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 CNTNAP2Q9UHC6 1331 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 TCRBV5S1A1TA0A578 114 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 TCF4P15884 667 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 SSTR3P32745 418 aaPredicted RBP13.51□□□□□ -0.25
CTPS1-202ENST00000372621 ZNF132P52740 706 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 WDR4P57081 412 aaKnown RBP13.51□□□□□ -0.25
CTPS1-202ENST00000372621 ACTR2P61160 394 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 ZNF252P-AS1Q0IIN9 211 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 STRN3Q13033 797 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 ATP13A4Q4VNC1 1196 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 ZBTB41Q5SVQ8 909 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 TDRPQ86YL5 185 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 UBR7Q8N806 425 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 RBBP8NLQ8NC74 664 aaPredicted RBP13.51□□□□□ -0.25
CTPS1-202ENST00000372621 SLITRK1Q96PX8 696 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 FHDC1Q9C0D6 1143 aaPredicted RBP13.51□□□□□ -0.25
CTPS1-202ENST00000372621 CXorf56Q9H5V9 222 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 MYOZ2Q9NPC6 264 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 PARVAQ9NVD7 372 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 BAIAP2L1Q9UHR4 511 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 PNMA3Q9UL41 463 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 DNPEPQ9ULA0 475 aa13.51□□□□□ -0.25
CTPS1-202ENST00000372621 ADGRA2Q96PE1 1338 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 DNALI1O14645 258 aaPredicted RBP13.5□□□□□ -0.25
CTPS1-202ENST00000372621 MAGEB2O15479 319 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 MMP8P22894 467 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms