RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ARHGEF19Q8IW93 802 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 PPM1KQ8N3J5 372 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 RAD9AQ99638 391 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 PAAF1Q9BRP4 392 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 CWH43Q9H720 699 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 UBE2TQ9NPD8 197 aaPredicted RBP17.01■□□□□ 0.31
TMEM53-204ENST00000372243 DNAJB4Q9UDY4 337 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 DNAJC12Q9UKB3 198 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 GOLGA6L6A8MZA4 724 aa17■□□□□ 0.31
TMEM53-204ENST00000372243 CUL2Q13617 745 aa17■□□□□ 0.31
TMEM53-204ENST00000372243 C9orf50Q5SZB4 431 aa17■□□□□ 0.31
TMEM53-204ENST00000372243 IQCEQ6IPM2 695 aa17■□□□□ 0.31
TMEM53-204ENST00000372243 DPH6Q7L8W6 267 aa17■□□□□ 0.31
TMEM53-204ENST00000372243 CACNA2D4Q7Z3S7 1137 aa17■□□□□ 0.31
TMEM53-204ENST00000372243 SP7Q8TDD2 431 aaPredicted RBP17■□□□□ 0.31
TMEM53-204ENST00000372243 ZBED2Q9BTP6 218 aa17■□□□□ 0.31
TMEM53-204ENST00000372243 STK33Q9BYT3 514 aa17■□□□□ 0.31
TMEM53-204ENST00000372243 BCO2Q9BYV7 579 aa17■□□□□ 0.31
TMEM53-204ENST00000372243 MYO6Q9UM54 1294 aa17■□□□□ 0.31
TMEM53-204ENST00000372243 FHOD1Q9Y613 1164 aa17■□□□□ 0.31
TMEM53-204ENST00000372243 H0YGN5 161 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 NRP1O14786 923 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 SPTLC1O15269 473 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 B3GAT3O94766 335 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 FAM163BP0C2L3 166 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 CASP14P31944 242 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 BMP8BP34820 402 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 ASPAP45381 313 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 OR1G1P47890 313 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 TNNC1P63316 161 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 CCDC173Q0VFZ6 552 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 SHHQ15465 462 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 GJB7Q6PEY0 223 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 RRAGAQ7L523 313 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 C3orf58Q8NDZ4 430 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 ZNF397Q8NF99 534 aaPredicted RBP16.99■□□□□ 0.31
TMEM53-204ENST00000372243 BAP1Q92560 729 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 RNPC3Q96LT9 517 aaKnown RBP16.99■□□□□ 0.31
TMEM53-204ENST00000372243 COLEC11Q9BWP8 271 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 UBE2OQ9C0C9 1292 aaKnown RBP16.99■□□□□ 0.31
TMEM53-204ENST00000372243 NUCKS1Q9H1E3 243 aaKnown RBP16.99■□□□□ 0.31
TMEM53-204ENST00000372243 CYP3A43Q9HB55 503 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 CACNG4Q9UBN1 327 aa16.99■□□□□ 0.31
TMEM53-204ENST00000372243 LUC7L2Q9Y383 392 aaKnown RBP16.99■□□□□ 0.31
TMEM53-204ENST00000372243 CLSTN1O94985 981 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 KIF4AO95239 1232 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 GALTP07902 379 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 SLC11A1P49279 550 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 ALDH7A1P49419 539 aaKnown RBP16.98■□□□□ 0.31
TMEM53-204ENST00000372243 FXR1P51114 621 aaKnown RBP eCLIP16.98■□□□□ 0.31
TMEM53-204ENST00000372243 BCAR1P56945 870 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 JAM2P57087 298 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 ZBED6P86452 979 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 ARID5BQ14865 1188 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 CD300LGQ6UXG3 332 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 LIMS2Q7Z4I7 341 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 CNGA4Q8IV77 575 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 FMNL3Q8IVF7 1028 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 TTC39CQ8N584 583 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 SPC24Q8NBT2 197 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 ELMO3Q96BJ8 720 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 KREMEN1Q96MU8 473 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 PPP1R9BQ96SB3 815 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 NLRC4Q9NPP4 1024 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.98■□□□□ 0.31
TMEM53-204ENST00000372243 NXF1Q9UBU9 619 aaKnown RBP16.98■□□□□ 0.31
TMEM53-204ENST00000372243 FAN1Q9Y2M0 1017 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 SNX9Q9Y5X1 595 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 TLL1O43897 1013 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 LAG3P18627 525 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 YWHAEP62258 255 aaKnown RBP16.98■□□□□ 0.31
TMEM53-204ENST00000372243 TOP6BLQ8N6T0 577 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 CPLX3Q8WVH0 158 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 SHC3Q92529 594 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 SPAG5Q96R06 1193 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 HCSTQ9UBK5 93 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 AJAP1Q9UKB5 411 aaPredicted RBP16.98■□□□□ 0.31
TMEM53-204ENST00000372243 POLIQ9UNA4 740 aa16.98■□□□□ 0.31
TMEM53-204ENST00000372243 MRPL42Q9Y6G3 142 aaKnown RBP16.98■□□□□ 0.31
TMEM53-204ENST00000372243 ARHGEF37A1IGU5 675 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 AKR1B15C9JRZ8 316 aaPredicted RBP16.97■□□□□ 0.31
TMEM53-204ENST00000372243 RNF225M0QZC1 329 aaPredicted RBP16.97■□□□□ 0.31
TMEM53-204ENST00000372243 M0QZQ0 153 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 TRAPPC3O43617 180 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 MFAP3LO75121 409 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 TACC1O75410 805 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 KRT9P35527 623 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 GSDMDP57764 484 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 RAPGEF1Q13905 1077 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 DRAP1Q14919 205 aaPredicted RBP16.97■□□□□ 0.31
TMEM53-204ENST00000372243 FIBCD1Q8N539 461 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 UBR7Q8N806 425 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 RABGGTAQ92696 567 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 SYN2Q92777 582 aaPredicted RBP16.97■□□□□ 0.31
TMEM53-204ENST00000372243 CLP1Q92989 425 aaKnown RBP16.97■□□□□ 0.31
TMEM53-204ENST00000372243 KAT5Q92993 513 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 SUSD3Q96L08 255 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 SENP8Q96LD8 212 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 MMS19Q96T76 1030 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 ARID3AQ99856 593 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms