RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 ZNF18P17022 549 aa17.58■□□□□ 0.4
TMEM53-203ENST00000372242 DEKP35659 375 aaKnown RBP17.58■□□□□ 0.4
TMEM53-203ENST00000372242 PIK3CAP42336 1068 aa17.58■□□□□ 0.4
TMEM53-203ENST00000372242 FAM171A1Q5VUB5 890 aa17.58■□□□□ 0.4
TMEM53-203ENST00000372242 LRRC52Q8N7C0 313 aa17.58■□□□□ 0.4
TMEM53-203ENST00000372242 ZNF560Q96MR9 790 aa17.58■□□□□ 0.4
TMEM53-203ENST00000372242 PI4K2AQ9BTU6 479 aa17.58■□□□□ 0.4
TMEM53-203ENST00000372242 PUF60Q9UHX1 559 aaKnown RBP17.58■□□□□ 0.4
TMEM53-203ENST00000372242 KPNA7A9QM74 516 aa17.57■□□□□ 0.4
TMEM53-203ENST00000372242 TRAPPC3O43617 180 aa17.57■□□□□ 0.4
TMEM53-203ENST00000372242 CLSTN1O94985 981 aa17.57■□□□□ 0.4
TMEM53-203ENST00000372242 AFPP02771 609 aaKnown RBP17.57■□□□□ 0.4
TMEM53-203ENST00000372242 CDK11BP21127 795 aaKnown RBP17.57■□□□□ 0.4
TMEM53-203ENST00000372242 EEF1GP26641 437 aaKnown RBP17.57■□□□□ 0.4
TMEM53-203ENST00000372242 ERVFC1P60507 584 aa17.57■□□□□ 0.4
TMEM53-203ENST00000372242 KRT31Q15323 416 aa17.57■□□□□ 0.4
TMEM53-203ENST00000372242 CEP57Q86XR8 500 aa17.57■□□□□ 0.4
TMEM53-203ENST00000372242 RNF168Q8IYW5 571 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-203ENST00000372242 RNF214Q8ND24 703 aa17.57■□□□□ 0.4
TMEM53-203ENST00000372242 AUTS2Q8WXX7 1259 aa17.57■□□□□ 0.4
TMEM53-203ENST00000372242 SEMA4DQ92854 862 aa17.57■□□□□ 0.4
TMEM53-203ENST00000372242 XYLT2Q9H1B5 865 aa17.57■□□□□ 0.4
TMEM53-203ENST00000372242 TAB2Q9NYJ8 693 aa17.57■□□□□ 0.4
TMEM53-203ENST00000372242 PCDHGC5Q9Y5F6 944 aa17.57■□□□□ 0.4
TMEM53-203ENST00000372242 SOD2P04179 222 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 TKTP29401 623 aaKnown RBP17.56■□□□□ 0.4
TMEM53-203ENST00000372242 PNPLA4P41247 253 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 AARSP49588 968 aaKnown RBP eCLIP17.56■□□□□ 0.4
TMEM53-203ENST00000372242 MYL7Q01449 175 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 MYO1EQ12965 1108 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 MAN2A1Q16706 1144 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 SV2CQ496J9 727 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 MIIPQ5JXC2 388 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 DSTYKQ6XUX3 929 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 FBXL13Q8NEE6 735 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 SUSD3Q96L08 255 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 SENP8Q96LD8 212 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 LZTS1Q9Y250 596 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 TIMM13Q9Y5L4 95 aaPredicted RBP17.56■□□□□ 0.4
TMEM53-203ENST00000372242 PES1O00541 588 aaKnown RBP17.56■□□□□ 0.4
TMEM53-203ENST00000372242 C2CD2LO14523 706 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 IRS1P35568 1242 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 WDR72Q3MJ13 1102 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 RTP2Q5QGT7 225 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 SPOPLQ6IQ16 392 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 TMC7Q7Z402 723 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 DEFB123Q8N688 67 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 TCF25Q9BQ70 676 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 VPS16Q9H269 839 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 NDST4Q9H3R1 872 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 TLR9Q9NR96 1032 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 SNX9Q9Y5X1 595 aa17.56■□□□□ 0.4
TMEM53-203ENST00000372242 CYB561D2O14569 222 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 CA8P35219 290 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 UBE3AQ05086 875 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 ELAVL2Q12926 359 aaKnown RBP17.55■□□□□ 0.4
TMEM53-203ENST00000372242 ZNF699Q32M78 642 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 USP41Q3LFD5 358 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 VWA3BQ502W6 1294 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 KIAA1841Q6NSI8 718 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 GPR153Q6NV75 609 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 MICAL1Q8TDZ2 1067 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 ZBP1Q9H171 429 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 ENTPD7Q9NQZ7 604 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 CHST7Q9NS84 486 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 RAB20Q9NX57 234 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 NXF1Q9UBU9 619 aaKnown RBP17.55■□□□□ 0.4
TMEM53-203ENST00000372242 VWA8A3KMH1 1905 aa17.55■□□□□ 0.4
TMEM53-203ENST00000372242 GOLGA6L19H0YKK7 550 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 M0QZQ0 153 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 FGFR3P22607 806 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 SGSM1Q2NKQ1 1148 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 PLPP4Q5VZY2 271 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 CRACR2AQ9BSW2 395 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 TTPALQ9BTX7 342 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 HERC2P3Q9BVR0 1158 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 LIMA1Q9UHB6 759 aaKnown RBP17.54■□□□□ 0.4
TMEM53-203ENST00000372242 POLIQ9UNA4 740 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 COQ4Q9Y3A0 265 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 N4BP1O75113 896 aaKnown RBP17.54■□□□□ 0.4
TMEM53-203ENST00000372242 ASS1P00966 412 aaKnown RBP17.54■□□□□ 0.4
TMEM53-203ENST00000372242 CTSAP10619 480 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 ATICP31939 592 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 GLUD2P49448 558 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 ADGRE1Q14246 886 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 PRSS55Q6UWB4 352 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-203ENST00000372242 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-203ENST00000372242 GAS2L3Q86XJ1 694 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 RIN2Q8WYP3 895 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-203ENST00000372242 MMS19Q96T76 1030 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 APOBEC3GQ9HC16 384 aaKnown RBP17.54■□□□□ 0.4
TMEM53-203ENST00000372242 GDAP2Q9NXN4 497 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 PCDHB8Q9UN66 801 aa17.54■□□□□ 0.4
TMEM53-203ENST00000372242 HIDE1A8MVS5 230 aa17.53■□□□□ 0.4
TMEM53-203ENST00000372242 CXCL14O95715 111 aa17.53■□□□□ 0.4
TMEM53-203ENST00000372242 URODP06132 367 aa17.53■□□□□ 0.4
TMEM53-203ENST00000372242 ODC1P11926 461 aa17.53■□□□□ 0.4
TMEM53-203ENST00000372242 COPB1P53618 953 aaKnown RBP17.53■□□□□ 0.4
TMEM53-203ENST00000372242 DSG1Q02413 1049 aa17.53■□□□□ 0.4
TMEM53-203ENST00000372242 SOWAHAQ2M3V2 549 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms