RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 MAPTP10636 758 aaKnown RBP12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 SHMT1P34896 483 aa12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 SNAPC2Q13487 334 aa12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 UGP2Q16851 508 aa12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 KIF19Q2TAC6 998 aa12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 MFSD14CQ5VZR4 134 aa12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 CBWD2Q8IUF1 395 aa12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 KIRREL3Q8IZU9 778 aa12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 CERKQ8TCT0 537 aa12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 SERPINB12Q96P63 405 aa12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 SIK2Q9H0K1 926 aa12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 KIF9Q9HAQ2 790 aa12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 TMEM120BA0PK00 339 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 PSMD3O43242 534 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 PSTPIP1O43586 416 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 KITP10721 976 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 STIP1P31948 543 aaKnown RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 NAMPTP43490 491 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 SESN2P58004 480 aaPredicted RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 ZNF200P98182 395 aaPredicted RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 YWHAHQ04917 246 aaPredicted RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 KATNAL1Q9BW62 490 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 RANBP17Q9H2T7 1088 aaKnown RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 DMGDHQ9UI17 866 aaKnown RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 F8VZ95 297 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 RALAP11233 206 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 NPTX2P47972 431 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 RGS7P49802 495 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 AP2B1P63010 937 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 SLC15A2Q16348 729 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 C3orf20Q8ND61 904 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 HIPK4Q8NE63 616 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 OR6P1Q8NGX9 317 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 PGBD4Q96DM1 585 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 SEC16BQ96JE7 1060 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 FGD4Q96M96 766 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 FAM161BQ96MY7 647 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 CBWD1Q9BRT8 395 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 C3orf70A6NLC5 250 aaPredicted RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 PHF20L1A8MW92 1017 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 PIK3R2O00459 728 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 NVLO15381 856 aaKnown RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 WEE2P0C1S8 567 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 PYGBP11216 843 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 PMS1P54277 932 aaKnown RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 POU5F1BQ06416 359 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 LAMC2Q13753 1193 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 EFCAB12Q6NXP0 572 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 FAM83AQ86UY5 434 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 CASKIN2Q8WXE0 1202 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 RAPGEF5Q92565 580 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 EXT2Q93063 718 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 CCDC138Q96M89 665 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 PNMA5Q96PV4 448 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 FRMD8P1Q9BZ68 369 aaPredicted RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 SP110Q9HB58 689 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 XPO7Q9UIA9 1087 aaKnown RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 TRPA1O75762 1119 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 CYP2C8P10632 490 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 KDM7AQ6ZMT4 941 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 RASSF3Q86WH2 238 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 ZNF507Q8TCN5 953 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 DUSP9Q99956 384 aaKnown RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 TRPV6Q9H1D0 765 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 SUDS3Q9H7L9 328 aaPredicted RBP12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 PLEKHA5Q9HAU0 1116 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 KCND1Q9NSA2 647 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 EHD2Q9NZN4 543 aa12.45□□□□□ -0.42
DEPDC1-201ENST00000370966 TRAPPC3O43617 180 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 SNX2O60749 519 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 CYP11B1P15538 503 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 DPEP1P16444 411 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 GPD1P21695 349 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 PTGISQ16647 500 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 TMEM119Q4V9L6 283 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 MEI1Q5TIA1 1274 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 PCNX4Q63HM2 1172 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 C3orf62Q6ZUJ4 267 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 ZNF571Q7Z3V5 609 aaPredicted RBP12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 AGGF1Q8N302 714 aaeCLIP12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 CYFIP2Q96F07 1278 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 TSSK1BQ9BXA7 367 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 KIAA1257Q9ULG3 409 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 RRN3P2A6NIE6 340 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 RARGP13631 454 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 BACE1P56817 501 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 EPC2Q52LR7 807 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 TMTC4Q5T4D3 741 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 ANKRD13AQ8IZ07 590 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 CCDC124Q96CT7 223 aaKnown RBP12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 KIFC3Q9BVG8 833 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 ZNF518BQ9C0D4 1074 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 CCDC195A0A1B0GUA6 201 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 DYNC1LI2O43237 492 aaPredicted RBP12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 MGEA5O60502 916 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 SNRPAP09012 282 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms