RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 MTRRQ9UBK8 725 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 PCDHB13Q9Y5F0 798 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 BACE2Q9Y5Z0 518 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 STYXL1Q9Y6J8 313 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 FRYLO94915 3013 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 FANCMQ8IYD8 2048 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 LACTBL1A8MY62 500 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 SPATA31D3P0C874 917 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 KCNE1P15382 129 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 ABCD1P33897 745 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 UPP1Q16831 310 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 KMT5BQ4FZB7 885 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 FAM171A1Q5VUB5 890 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 SPATA31D4Q6ZUB0 917 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 EPM2AIP1Q7L775 607 aaPredicted RBP16.47■□□□□ 0.23
SS18L1-202ENST00000370848 ASCL5Q7RTU5 278 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 NELFCDQ8IXH7 590 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 SYCP3Q8IZU3 236 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 POMGNT1Q8WZA1 660 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 SAAL1Q96ER3 474 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 CBWD1Q9BRT8 395 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 DLGAP2Q9P1A6 1054 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 TUBGCP4Q9UGJ1 667 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 USP25Q9UHP3 1055 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 CPSF3Q9UKF6 684 aaKnown RBP16.47■□□□□ 0.23
SS18L1-202ENST00000370848 EXOC7Q9UPT5 735 aa16.47■□□□□ 0.23
SS18L1-202ENST00000370848 PDCD11Q14690 1871 aaKnown RBP16.47■□□□□ 0.23
SS18L1-202ENST00000370848 DOCK6Q96HP0 2047 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 PVALEFA0A1B0GWK0 134 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 TTC26A0AVF1 554 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 GADD45BO75293 160 aaPredicted RBP16.46■□□□□ 0.23
SS18L1-202ENST00000370848 CLCNKBP51801 687 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 GUCY2FP51841 1108 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 WNT7BP56706 349 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 ALCAMQ13740 583 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 DCLRE1AQ6PJP8 1040 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 CRELD2Q6UXH1 353 aaPredicted RBP16.46■□□□□ 0.23
SS18L1-202ENST00000370848 FMR1NBQ8N0W7 255 aaPredicted RBP16.46■□□□□ 0.23
SS18L1-202ENST00000370848 DTWD2Q8NBA8 298 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 C3orf58Q8NDZ4 430 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 FLCNQ8NFG4 579 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 SCFD1Q8WVM8 642 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 FAM212AQ96EL1 285 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 PCIF1Q9H4Z3 704 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 RPF1Q9H9Y2 349 aaKnown RBP16.46■□□□□ 0.23
SS18L1-202ENST00000370848 PIDD1Q9HB75 910 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 AVENQ9NQS1 362 aaPredicted RBP16.46■□□□□ 0.23
SS18L1-202ENST00000370848 FBXL21Q9UKT6 434 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 AGO2Q9UKV8 859 aaKnown RBP16.46■□□□□ 0.23
SS18L1-202ENST00000370848 CDH7Q9ULB5 785 aa16.46■□□□□ 0.23
SS18L1-202ENST00000370848 GOLGA8IPA6NC78 632 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 GOLGA6L4A6NEF3 574 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 GOLGA8JA6NMD2 632 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 ADAM12O43184 909 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 C8AP07357 584 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 FSHRP23945 695 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 PPP2R3AQ06190 1150 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 DPYDQ12882 1025 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 STK4Q13043 487 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 SNW1Q13573 536 aaKnown RBP16.45■□□□□ 0.22
SS18L1-202ENST00000370848 ANGPT1Q15389 498 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 LIN9Q5TKA1 542 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 SLFN12LQ6IEE8 588 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 SLC8B1Q6J4K2 584 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 KIAA0895Q8NCT3 520 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 ENGASEQ8NFI3 743 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 KIF12Q96FN5 646 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 DDX23Q9BUQ8 820 aaKnown RBP16.45■□□□□ 0.22
SS18L1-202ENST00000370848 EXOC1Q9NV70 894 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 NUMBLQ9Y6R0 609 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 CACNA1AO00555 2505 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 CITO14578 2027 aa16.45■□□□□ 0.22
SS18L1-202ENST00000370848 DMXL1Q9Y485 3027 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 I3L4J1 428 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 PODXLO00592 558 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 EIF3DO15371 548 aaKnown RBP eCLIP16.44■□□□□ 0.22
SS18L1-202ENST00000370848 TBC1D4O60343 1298 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 RPN1P04843 607 aaKnown RBP16.44■□□□□ 0.22
SS18L1-202ENST00000370848 CFHP08603 1231 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 NFICP08651 508 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 BRCC3P46736 316 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 STARD6P59095 220 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 RSPO2Q6UXX9 243 aaPredicted RBP16.44■□□□□ 0.22
SS18L1-202ENST00000370848 ANKS3Q6ZW76 656 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 GET4Q7L5D6 327 aaPredicted RBP16.44■□□□□ 0.22
SS18L1-202ENST00000370848 GRASPQ7Z6J2 395 aaPredicted RBP16.44■□□□□ 0.22
SS18L1-202ENST00000370848 GLYCTKQ8IVS8 523 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 ZNF507Q8TCN5 953 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 GPR152Q8TDT2 470 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 FGF14Q92915 247 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 DDX27Q96GQ7 796 aaKnown RBP16.44■□□□□ 0.22
SS18L1-202ENST00000370848 FAM84AQ96KN4 292 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 FAM213AQ9BRX8 229 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 TMEM206Q9H813 350 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 ARHGEF3Q9NR81 526 aa16.44■□□□□ 0.22
SS18L1-202ENST00000370848 PTPRZ1P23471 2315 aaPredicted RBP16.44■□□□□ 0.22
SS18L1-202ENST00000370848 ARHGEF37A1IGU5 675 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 TGFB1I1O43294 461 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 TRAPPC3O43617 180 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 XYLBO75191 536 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms