RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 PTPRHQ9HD43 1115 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 ERAP1Q9NZ08 941 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 NFU1Q9UMS0 254 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 GOLGA6L7A0A1B0GV03 622 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 TMEM110-MUSTN1A8MSY1 372 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 C22orf31O95567 290 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 CST3P01034 146 aaPredicted RBP13.66□□□□□ -0.22
GPC3-201ENST00000370818 RPSAP08865 295 aaKnown RBP13.66□□□□□ -0.22
GPC3-201ENST00000370818 CLTAP09496 248 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 ZNF211Q13398 564 aaPredicted RBP13.66□□□□□ -0.22
GPC3-201ENST00000370818 NCOA4Q13772 614 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 MESDQ14696 234 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 SPRED3Q2MJR0 410 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 CPNE8Q86YQ8 564 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 IQCKQ8N0W5 287 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 CD101Q93033 1021 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 CAVIN3Q969G5 261 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 RPS6KC1Q96S38 1066 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 OSBPL7Q9BZF2 842 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 KATNBL1Q9H079 304 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 C2orf40Q9H1Z8 148 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 MINDY3Q9H8M7 445 aa13.66□□□□□ -0.22
GPC3-201ENST00000370818 CPSF3Q9UKF6 684 aaKnown RBP13.66□□□□□ -0.22
GPC3-201ENST00000370818 BHMG1C9JSJ3 638 aaPredicted RBP13.65□□□□□ -0.22
GPC3-201ENST00000370818 OGTO15294 1046 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 B4GALT5O43286 388 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 FAM153BP0C7A2 387 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 IQCF3P0C7M6 154 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 SLC8A1P32418 973 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 MDH1P40925 334 aaKnown RBP13.65□□□□□ -0.22
GPC3-201ENST00000370818 ADCY2Q08462 1091 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 LAMC2Q13753 1193 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 KCTD19Q17RG1 926 aaPredicted RBP13.65□□□□□ -0.22
GPC3-201ENST00000370818 FAM153CQ494X1 144 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 TSHZ1Q6ZSZ6 1077 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 CCDC121Q6ZUS5 278 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 ZNF677Q86XU0 584 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 WDR49Q8IV35 697 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 IFT81Q8WYA0 676 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 ZSWIM1Q9BR11 485 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 HAUS2Q9NVX0 235 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 UVRAGQ9P2Y5 699 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 FAM153AQ9UHL3 310 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 CNTN6Q9UQ52 1028 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 MIF4GDA9UHW6 222 aaKnown RBP13.65□□□□□ -0.22
GPC3-201ENST00000370818 ACKR2O00590 384 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 LGALS2P05162 132 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 CFHP08603 1231 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 GBP2P32456 591 aaPredicted RBP13.65□□□□□ -0.22
GPC3-201ENST00000370818 PEX5P50542 639 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 GTF2A2P52657 109 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 PTENP60484 403 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 POU5F1Q01860 360 aaKnown RBP13.65□□□□□ -0.22
GPC3-201ENST00000370818 GRM1Q13255 1194 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 AADACL2Q6P093 401 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 TMEM270Q6UE05 265 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 MTMR12Q9C0I1 747 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 MORF4L1Q9UBU8 362 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 CNOT8Q9UFF9 292 aaKnown RBP13.65□□□□□ -0.22
GPC3-201ENST00000370818 AMACRQ9UHK6 382 aa13.65□□□□□ -0.22
GPC3-201ENST00000370818 RBM47A0AV96 593 aaKnown RBP13.64□□□□□ -0.23
GPC3-201ENST00000370818 SRRM3A6NNA2 597 aaPredicted RBP13.64□□□□□ -0.23
GPC3-201ENST00000370818 INO80B-WBP1J3KQ70 363 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 ASS1P00966 412 aaKnown RBP13.64□□□□□ -0.23
GPC3-201ENST00000370818 CYP1A1P04798 512 aaPredicted RBP13.64□□□□□ -0.23
GPC3-201ENST00000370818 INSRRP14616 1297 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 BPIFB4P59827 614 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 MBTD1Q05BQ5 628 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 MCOLN2Q8IZK6 566 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 ABRAQ8N0Z2 381 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 CPA5Q8WXQ8 436 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 INO80BQ9C086 356 aaPredicted RBP13.64□□□□□ -0.23
GPC3-201ENST00000370818 VTA1Q9NP79 307 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 PCDHB4Q9Y5E5 795 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 SNAI1O95863 264 aaPredicted RBP13.64□□□□□ -0.23
GPC3-201ENST00000370818 TBXAS1P24557 533 aaPredicted RBP13.64□□□□□ -0.23
GPC3-201ENST00000370818 ECHS1P30084 290 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 GCKP35557 465 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 ADCYAP1R1P41586 468 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 PAK2Q13177 524 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 TFDP1Q14186 410 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 ACCSLQ4AC99 568 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 ATF7IP2Q5U623 682 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 EEF1DP3Q658K8 133 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 MPZL3Q6UWV2 235 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 ANKRD23Q86SG2 305 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 CDR2LQ86X02 465 aaPredicted RBP13.64□□□□□ -0.23
GPC3-201ENST00000370818 PPTC7Q8NI37 304 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 AFG1LQ8WV93 481 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 CYFIP2Q96F07 1278 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 SH3GL3Q99963 347 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 KIF9Q9HAQ2 790 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 IFT122Q9HBG6 1241 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 ERVK-5Q9HDB9 667 aa13.64□□□□□ -0.23
GPC3-201ENST00000370818 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.64□□□□□ -0.23
GPC3-201ENST00000370818 PCNTO95613 3336 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.63□□□□□ -0.23
GPC3-201ENST00000370818 STRNO43815 780 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 MGRN1O60291 552 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 GH1P01241 217 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms