RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 FAM84AQ96KN4 292 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 VN1R3Q9BXE9 311 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 ZBP1Q9H171 429 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 TSPY26PQ9H489 355 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 MMRN2Q9H8L6 949 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 VRTNQ9H8Y1 702 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 CHST7Q9NS84 486 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 LAMA2P24043 3122 aaKnown RBP16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 AFPP02771 609 aaKnown RBP16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 URODP06132 367 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 CTSAP10619 480 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 POU3F3P20264 500 aaPredicted RBP16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 FGFR3P22607 806 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 DNAJB1P25685 340 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 BRCC3P46736 316 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 FMO5P49326 533 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 KCNH2Q12809 1159 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 IQCB1Q15051 598 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 MAN2A1Q16706 1144 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 SGSM1Q2NKQ1 1148 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 FAM171A1Q5VUB5 890 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 KIAA1841Q6NSI8 718 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 TMC7Q7Z402 723 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 TMEM130Q8N3G9 435 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 DEFB123Q8N688 67 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 CCDC150Q8NCX0 1101 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 FBXL13Q8NEE6 735 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 APPL2Q8NEU8 664 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 GAS2L1Q99501 681 aaPredicted RBP16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 TCF25Q9BQ70 676 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 TTPALQ9BTX7 342 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 IMPG2Q9BZV3 1241 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 GDAP2Q9NXN4 497 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 DSEQ9UL01 958 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 PCDHB8Q9UN66 801 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 COQ4Q9Y3A0 265 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 IRAK3Q9Y616 596 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 RFXAPO00287 272 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 FSCN2O14926 492 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 SPTLC1O15269 473 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 VNN1O95497 513 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 TPM2P07951 284 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 ODC1P11926 461 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 ZNF18P17022 549 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 IGFBP6P24592 240 aaPredicted RBP16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 PIK3CAP42336 1068 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 GLUD2P49448 558 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 TPM4P67936 248 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 DSG1Q02413 1049 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 CREMQ03060 361 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 CAMK1Q14012 370 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 SMC1AQ14683 1233 aaKnown RBP16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 CBWD6Q4V339 395 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 CBWD3Q5JTY5 395 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 CBWD5Q5RIA9 395 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 FAM161BQ96MY7 647 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 TUBGCP2Q9BSJ2 902 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 XYLT2Q9H1B5 865 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 CBX8Q9HC52 389 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 ENTPD7Q9NQZ7 604 aa16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 MRPL17Q9NRX2 175 aaKnown RBP16.71■□□□□ 0.27
PRPF38B-202ENST00000370022 HLA-DRAP01903 254 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 TYMPP19971 482 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 ERVFC1P60507 584 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 MYL6P60660 151 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 MYL7Q01449 175 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 ZNF699Q32M78 642 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 HSP90AA4PQ58FG1 418 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 DPH6Q7L8W6 267 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 SPATA18Q8TC71 538 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 MICAL1Q8TDZ2 1067 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 TAS1R2Q8TE23 839 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 FAXDC2Q96IV6 333 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 SENP8Q96LD8 212 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 RAB20Q9NX57 234 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 COL4A4P53420 1690 aaPredicted RBP16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 PLXNA4Q9HCM2 1894 aa16.7■□□□□ 0.26
PRPF38B-202ENST00000370022 I3L4J1 428 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 CYB561D2O14569 222 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 HUS1O60921 280 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 ASS1P00966 412 aaKnown RBP16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 CYP11A1P05108 521 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 FAM163BP0C2L3 166 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 P4HA1P13674 534 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 CDK11BP21127 795 aaKnown RBP16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 WDR72Q3MJ13 1102 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 VWA3BQ502W6 1294 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 ZNF667Q5HYK9 610 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 KIAA0319Q5VV43 1072 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 ANKS3Q6ZW76 656 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 TAS1R1Q7RTX1 841 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 CEP57Q86XR8 500 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 TOP6BLQ8N6T0 577 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 MRPL43Q8N983 215 aaKnown RBP16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 PIK3R5Q8WYR1 880 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 PPP2R3CQ969Q6 453 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 OXCT2Q9BYC2 517 aaPredicted RBP16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 HSD3B7Q9H2F3 369 aa16.69■□□□□ 0.26
PRPF38B-202ENST00000370022 SNX9Q9Y5X1 595 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms