RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 FDX1P10109 184 aa13.02□□□□□ -0.33
PHGDH-201ENST00000369407 TCF4P15884 667 aa13.02□□□□□ -0.33
PHGDH-201ENST00000369407 PTPN4P29074 926 aa13.02□□□□□ -0.33
PHGDH-201ENST00000369407 PDK4Q16654 411 aa13.02□□□□□ -0.33
PHGDH-201ENST00000369407 LMBRD2Q68DH5 695 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-201ENST00000369407 ACAD10Q6JQN1 1059 aa13.02□□□□□ -0.33
PHGDH-201ENST00000369407 MORC4Q8TE76 937 aa13.02□□□□□ -0.33
PHGDH-201ENST00000369407 SLCO2A1Q92959 643 aa13.02□□□□□ -0.33
PHGDH-201ENST00000369407 DDX27Q96GQ7 796 aaKnown RBP13.02□□□□□ -0.33
PHGDH-201ENST00000369407 EPAS1Q99814 870 aa13.02□□□□□ -0.33
PHGDH-201ENST00000369407 UVRAGQ9P2Y5 699 aa13.02□□□□□ -0.33
PHGDH-201ENST00000369407 HEY2Q9UBP5 337 aa13.02□□□□□ -0.33
PHGDH-201ENST00000369407 WASF2Q9Y6W5 498 aa13.02□□□□□ -0.33
PHGDH-201ENST00000369407 SLC26A4O43511 780 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 TCEA3O75764 348 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 IFNB1P01574 187 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 ZCCHC18P0CG32 403 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 PRELPP51888 382 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 JAG1P78504 1218 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 MDH1BQ5I0G3 518 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 TTC7BQ86TV6 843 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 LRRC6Q86X45 466 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 XXYLT1Q8NBI6 393 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 GRK7Q8WTQ7 553 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 POMGNT1Q8WZA1 660 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 NACC1Q96RE7 527 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 ARMCX1Q9P291 453 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 SBF2Q86WG5 1849 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 MYH11P35749 1972 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 GRIN3BO60391 1043 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 TBX10O75333 385 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 ACADSP16219 412 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 ATF7P17544 494 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-201ENST00000369407 KCNA3P22001 575 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 RASSF2P50749 326 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 MFAP3P55082 362 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 NFIL3Q16649 462 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 FAM98CQ17RN3 349 aaKnown RBP13.01□□□□□ -0.33
PHGDH-201ENST00000369407 WASHC2DQ5SRD0 308 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 KLHL23Q8NBE8 558 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 PTPRN2Q92932 1015 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 ZNF577Q9BSK1 485 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 TRIM4Q9C037 500 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 DCLRE1BQ9H816 532 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 TUFT1Q9NNX1 390 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 SLC17A7Q9P2U7 560 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 DNPEPQ9ULA0 475 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 ZNF148Q9UQR1 794 aa13.01□□□□□ -0.33
PHGDH-201ENST00000369407 ATP2B4P23634 1241 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 CIITAP33076 1130 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 GPS1Q13098 491 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 TCEAL1Q15170 157 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 PDCD2Q16342 344 aaPredicted RBP13□□□□□ -0.33
PHGDH-201ENST00000369407 OR52E8Q6IFG1 317 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 RINLQ6ZS11 566 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 CCDC89Q8N998 374 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 SHC3Q92529 594 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 FAM136AQ96C01 138 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 C11orf70Q9BRQ4 267 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 OSBPL8Q9BZF1 889 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 TNRC6CQ9HCJ0 1690 aaKnown RBP13□□□□□ -0.33
PHGDH-201ENST00000369407 SPATA31A5Q5VU36 1347 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 SPATA31A6Q5VVP1 1343 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 SPATA31A7Q8IWB4 1347 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 FOSP01100 380 aaPredicted RBP13□□□□□ -0.33
PHGDH-201ENST00000369407 RFX1P22670 979 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 VHLP40337 213 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 ARSEP51690 589 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 ZBTB16Q05516 673 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 SEPT7Q16181 437 aaKnown RBP13□□□□□ -0.33
PHGDH-201ENST00000369407 CTC1Q2NKJ3 1217 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 EAPPQ56P03 285 aaPredicted RBP13□□□□□ -0.33
PHGDH-201ENST00000369407 KBTBD2Q8IY47 623 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 HELQQ8TDG4 1101 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 DDX1Q92499 740 aaKnown RBP13□□□□□ -0.33
PHGDH-201ENST00000369407 CFAP57Q96MR6 1250 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 STOML1Q9UBI4 398 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 ASB3Q9Y575 518 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 XIRP1Q702N8 1843 aaKnown RBP13□□□□□ -0.33
PHGDH-201ENST00000369407 MAGEB2O15479 319 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 GYG2O15488 501 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 NPTXRO95502 500 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 SERPINB3P29508 390 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 SSTR1P30872 391 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 CETN2P41208 172 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 NEK3P51956 506 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 CACNA2D1P54289 1103 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 PEX3P56589 373 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 NR1H3Q13133 447 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 SYCP2LQ5T4T6 812 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 VPS52Q8N1B4 723 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 MKL1Q969V6 931 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 MCUR1Q96AQ8 359 aa13□□□□□ -0.33
PHGDH-201ENST00000369407 SIGLEC16A6NMB1 481 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 ROR2Q01974 943 aaKnown RBP12.99□□□□□ -0.33
PHGDH-201ENST00000369407 CAV1Q03135 178 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 PDIA2Q13087 525 aaKnown RBP12.99□□□□□ -0.33
PHGDH-201ENST00000369407 THOC5Q13769 683 aaKnown RBP12.99□□□□□ -0.33
PHGDH-201ENST00000369407 CLEC16AQ2KHT3 1053 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 LRRC23Q53EV4 343 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms