RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 LBRQ14739 615 aaKnown RBP9.54□□□□□ -0.88
TPM3-213ENST00000368545 NFE2Q16621 373 aaPredicted RBP9.54□□□□□ -0.88
TPM3-213ENST00000368545 UGCGQ16739 394 aa9.54□□□□□ -0.88
TPM3-213ENST00000368545 BMT2Q1RMZ1 405 aa9.54□□□□□ -0.88
TPM3-213ENST00000368545 EDRF1Q3B7T1 1238 aa9.54□□□□□ -0.88
TPM3-213ENST00000368545 ZCWPW2Q504Y3 356 aa9.54□□□□□ -0.88
TPM3-213ENST00000368545 CEP135Q66GS9 1140 aa9.54□□□□□ -0.88
TPM3-213ENST00000368545 ABHD15Q6UXT9 468 aa9.54□□□□□ -0.88
TPM3-213ENST00000368545 UNC5AQ6ZN44 842 aa9.54□□□□□ -0.88
TPM3-213ENST00000368545 EPM2AIP1Q7L775 607 aaPredicted RBP9.54□□□□□ -0.88
TPM3-213ENST00000368545 MRPL44Q9H9J2 332 aaKnown RBP9.54□□□□□ -0.88
TPM3-213ENST00000368545 TBC1D7Q9P0N9 293 aa9.54□□□□□ -0.88
TPM3-213ENST00000368545 LARSQ9P2J5 1176 aaKnown RBP9.54□□□□□ -0.88
TPM3-213ENST00000368545 CORINQ9Y5Q5 1042 aa9.54□□□□□ -0.88
TPM3-213ENST00000368545 ITIH6Q6UXX5 1313 aa9.54□□□□□ -0.88
TPM3-213ENST00000368545 RSPH10B2B2RC85 870 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 ALG1L2C9J202 215 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 N4BP3O15049 544 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 SUSD5O60279 629 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 COBLO75128 1261 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 GNA14O95837 355 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 RSPH10BP0C881 870 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 CD33P20138 364 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 SFPQP23246 707 aaKnown RBP eCLIP9.53□□□□□ -0.88
TPM3-213ENST00000368545 TLE2Q04725 743 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 ALCAMQ13740 583 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 TRIM67Q6ZTA4 783 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 CYFIP1Q7L576 1253 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 IRF2BP1Q8IU81 584 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 LRRC8AQ8IWT6 810 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 MYCT1Q8N699 235 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 SCFD1Q8WVM8 642 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 CNOT6LQ96LI5 555 aaKnown RBP9.53□□□□□ -0.88
TPM3-213ENST00000368545 MCM8Q9UJA3 840 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 CALUO43852 315 aaPredicted RBP9.53□□□□□ -0.88
TPM3-213ENST00000368545 GFRA3O60609 400 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 HIP1RO75146 1068 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 GCNT3O95395 438 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 ADORA2AP29274 412 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 SOX5P35711 763 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 SP2Q02086 613 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 PRKCEQ02156 737 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 TRIM14Q14142 442 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 LRRC41Q15345 812 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 KNOP1Q1ED39 458 aaKnown RBP9.53□□□□□ -0.88
TPM3-213ENST00000368545 METTL7BQ6UX53 244 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 RIPOR1Q6ZS17 1223 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 LRRC55Q6ZSA7 311 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 GPR142Q7Z601 462 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 CCDC60Q8IWA6 550 aaPredicted RBP9.53□□□□□ -0.88
TPM3-213ENST00000368545 ZNF507Q8TCN5 953 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 SPOCK3Q9BQ16 436 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 TUBGCP2Q9BSJ2 902 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 EMILIN2Q9BXX0 1053 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 KCTD10Q9H3F6 313 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 KCNF1Q9H3M0 494 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 TRAF3IP3Q9Y228 551 aa9.53□□□□□ -0.88
TPM3-213ENST00000368545 DIS3Q9Y2L1 958 aaKnown RBP9.53□□□□□ -0.88
TPM3-213ENST00000368545 IGKV6D-21A0A0A0MT36 114 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 FAM86C2PA6NEL3 165 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 LGALS16A8MUM7 142 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 PDXKO00764 312 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 USO1O60763 962 aaKnown RBP9.52□□□□□ -0.89
TPM3-213ENST00000368545 CYBAP13498 195 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 PMLP29590 882 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 PBX1P40424 430 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 MTIF2P46199 727 aaKnown RBP9.52□□□□□ -0.89
TPM3-213ENST00000368545 GRB14Q14449 540 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 ZNF792Q3KQV3 632 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 MAP9Q49MG5 647 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 XKR9Q5GH70 373 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 XKR3Q5GH77 459 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 TMEM240Q5SV17 173 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 SWSAP1Q6NVH7 229 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 ZC3H3Q8IXZ2 948 aaKnown RBP9.52□□□□□ -0.89
TPM3-213ENST00000368545 CCDC112Q8NEF3 446 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 FGFBP2Q9BYJ0 223 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 C17orf75Q9HAS0 396 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 IL23AQ9NPF7 189 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 ZNF302Q9NR11 478 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 TAB2Q9NYJ8 693 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 DNMT3LQ9UJW3 386 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 SOX13Q9UN79 622 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.52□□□□□ -0.893e-17■■□□□ 13.6
TPM3-213ENST00000368545 PIEZO1Q92508 2521 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 A0A1W2PQC6 194 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 ZNF500O60304 480 aaPredicted RBP9.52□□□□□ -0.89
TPM3-213ENST00000368545 RFPL3O75679 317 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 DGAT1O75907 488 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 GGPS1O95749 300 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 TPM1P09493 284 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 MYBP10242 640 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 DNM2P50570 870 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 KCNQ1P51787 676 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 CASP5P51878 434 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 SP4Q02446 784 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 MAPK7Q13164 816 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 TBX2Q13207 712 aaPredicted RBP9.52□□□□□ -0.89
TPM3-213ENST00000368545 TTLL4Q14679 1199 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 NFIL3Q16649 462 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms