RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 GPRIN1Q7Z2K8 1008 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 SYT12Q8IV01 421 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 RAB24Q969Q5 203 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 C8orf48Q96LL4 319 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 KLK15Q9H2R5 256 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 LANCL2Q9NS86 450 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 MOCS1Q9NZB8 636 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 DDX20Q9UHI6 824 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 PNMA8BQ9ULN7 279 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 IPPQ9Y573 584 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 FPGT-TNNI3KV9GXZ4 949 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 CCDC154A6NI56 674 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 MARCH11A6NNE9 402 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 VSTM5A8MXK1 200 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 B5MCH6 92 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 WNT10BO00744 389 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 TEX33O43247 280 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 FOSP01100 380 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 CYP2C19P33261 490 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 SREBF1P36956 1147 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 TBX4P57082 545 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 IL10RAQ13651 578 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 ATP2B3Q16720 1220 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 PRAMEF14Q5SWL7 426 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 B3GNT9Q6UX72 402 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 RSPH3Q86UC2 560 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 RHOT1Q8IXI2 618 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 SPATA3Q8NHX4 192 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 HOXB13Q92826 284 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 KAT5Q92993 513 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 Q96MF0 132 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 ALOXE3Q9BYJ1 711 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 TDP1Q9NUW8 608 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 ZMYM3Q14202 1370 aa4.48□□□□□ -1.69
ECHDC1-201ENST00000368287 CNTNAP2Q9UHC6 1331 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 ARHGEF17Q96PE2 2063 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 AP1G1O43747 822 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 DTNBO60941 627 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 CDKL5O76039 1030 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 POU2F2P09086 479 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 SNRPA1P09661 255 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 CBSLP0DN79 551 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 PDCP20941 246 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 MGAT1P26572 445 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 CBSP35520 551 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 FLT3LGP49771 235 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 OCA2Q04671 838 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 SP140Q13342 867 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 GALEQ14376 348 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 IFIT1BQ5T764 474 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 CXorf57Q6NSI4 855 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 EFCAB12Q6NXP0 572 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 DRICH1Q6PGQ1 229 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 Q6ZNX1 250 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 ZNF788Q6ZQV5 615 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 ZNF572Q7Z3I7 529 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 TRMT2AQ8IZ69 625 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 PDPRQ8NCN5 879 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 REPS2Q8NFH8 660 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 CCHCR1Q8TD31 782 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 STON2Q8WXE9 905 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 ZBTB9Q96C00 473 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 TIFAQ96CG3 184 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 NUP88Q99567 741 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 POGKQ9P215 609 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 SLC17A6Q9P2U8 582 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 LRIT1Q9P2V4 623 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 AJAP1Q9UKB5 411 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 SIK3Q9Y2K2 1263 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 USP15Q9Y4E8 981 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 PCDHA13Q9Y5I0 950 aa4.47□□□□□ -1.69
ECHDC1-201ENST00000368287 POLR2AP24928 1970 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 SETD1BQ9UPS6 1966 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 A6NNZ2 444 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 TBKBP1A7MCY6 615 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 PJA2O43164 708 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 ADCY6O43306 1168 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 RAP2AP10114 183 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 AKAP5P24588 427 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 GNALP38405 381 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 SLC6A9P48067 706 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 CREMQ03060 361 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 GRM3Q14832 879 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 KLHL22Q53GT1 634 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 CRELD2Q6UXH1 353 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 TTC7BQ86TV6 843 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 PRR18Q8N4B5 295 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 FBXO18Q8NFZ0 1043 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 ZFP28Q8NHY6 868 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 PPP1R35Q8TAP8 253 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 SLC35G2Q8TBE7 412 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 CASKIN2Q8WXE0 1202 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 HPS3Q969F9 1004 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 RUNDC1Q96C34 613 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 AIFM3Q96NN9 605 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 TAAR9Q96RI9 348 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 LDAHQ9H6V9 325 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 MAN1C1Q9NR34 630 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 SLC52A1Q9NWF4 448 aa4.46□□□□□ -1.7
ECHDC1-201ENST00000368287 CFAP20Q9Y6A4 193 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms