RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 GOLPH3LQ9H4A5 285 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 CGNQ9P2M7 1197 aaKnown RBP10.68□□□□□ -0.7
CD48-202ENST00000368046 MTRRQ9UBK8 725 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 CCDC195A0A1B0GUA6 201 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 ANO9A1A5B4 782 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 GOLGA8IPA6NC78 632 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 GOLGA8JA6NMD2 632 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 M0QZQ0 153 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 TBC1D4O60343 1298 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 PAPLNO95428 1278 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 RPN1P04843 607 aaKnown RBP10.67□□□□□ -0.7
CD48-202ENST00000368046 MCM4P33991 863 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 AARSP49588 968 aaKnown RBP eCLIP10.67□□□□□ -0.7
CD48-202ENST00000368046 LILRA4P59901 499 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 SURF1Q15526 300 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 BMT2Q1RMZ1 405 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 UVSSAQ2YD98 709 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 KMT5BQ4FZB7 885 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 DMRTA1Q5VZB9 504 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 C9orf57Q5W0N0 161 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 SLC8B1Q6J4K2 584 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 RSPO2Q6UXX9 243 aaPredicted RBP10.67□□□□□ -0.7
CD48-202ENST00000368046 DSTYKQ6XUX3 929 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 RTL10Q7L3V2 364 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 BRSK2Q8IWQ3 736 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 NELFCDQ8IXH7 590 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 ZNF461Q8TAF7 563 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 CCDC47Q96A33 483 aaKnown RBP10.67□□□□□ -0.7
CD48-202ENST00000368046 RHOBTB2Q9BYZ6 727 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 SFXN1Q9H9B4 322 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 MAN1C1Q9NR34 630 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 AGPAT3Q9NRZ7 376 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 EXOC1Q9NV70 894 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 DPP3Q9NY33 737 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 RBAKQ9NYW8 714 aaPredicted RBP10.67□□□□□ -0.7
CD48-202ENST00000368046 HSPBP1Q9NZL4 362 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 CDY1Q9Y6F8 540 aa10.67□□□□□ -0.7
CD48-202ENST00000368046 TDRD15B5MCY1 1934 aaKnown RBP10.66□□□□□ -0.7
CD48-202ENST00000368046 UBE4BO95155 1302 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 LOC730098B7Z3J9 87 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 TULP1O00294 542 aaPredicted RBP10.66□□□□□ -0.7
CD48-202ENST00000368046 CLIC2O15247 247 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 ADAM12O43184 909 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 ZMYND10O75800 440 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 ABLIM3O94929 683 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 RHOBTB3O94955 611 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 OAZ2O95190 189 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 NFICP08651 508 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 WEE2P0C1S8 567 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 GUCY2FP51841 1108 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 DPYDQ12882 1025 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 SNW1Q13573 536 aaKnown RBP10.66□□□□□ -0.7
CD48-202ENST00000368046 HS2ST1Q7LGA3 356 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 C12orf56Q8IXR9 622 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 FMR1NBQ8N0W7 255 aaPredicted RBP10.66□□□□□ -0.7
CD48-202ENST00000368046 TMEM130Q8N3G9 435 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 XXYLT1Q8NBI6 393 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 RDH13Q8NBN7 331 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 ENGASEQ8NFI3 743 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 GOLGA5Q8TBA6 731 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 NOC3LQ8WTT2 800 aaKnown RBP10.66□□□□□ -0.7
CD48-202ENST00000368046 RPGRIP1Q96KN7 1286 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 SENP8Q96LD8 212 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 OXCT2Q9BYC2 517 aaPredicted RBP10.66□□□□□ -0.7
CD48-202ENST00000368046 ZDHHC7Q9NXF8 308 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 MYH11P35749 1972 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 MYH15Q9Y2K3 1946 aa10.66□□□□□ -0.7
CD48-202ENST00000368046 ATG2AQ2TAZ0 1938 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 ARHGEF37A1IGU5 675 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 PI4K2BG5E9Z4 385 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 PDXKO00764 312 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 PPEF2O14830 753 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 SPTLC1O15269 473 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 RFPL2O75678 378 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 KIF20AO95235 890 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 HNRNPA1P09651 372 aaKnown RBP eCLIP10.65□□□□□ -0.7
CD48-202ENST00000368046 ALADP13716 330 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 ATF2P15336 505 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 TYMPP19971 482 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 ANP32AP39687 249 aaKnown RBP10.65□□□□□ -0.7
CD48-202ENST00000368046 TAF6P49848 677 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 WNT7BP56706 349 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 TFAMQ00059 246 aaKnown RBP10.65□□□□□ -0.7
CD48-202ENST00000368046 YWHAHQ04917 246 aaPredicted RBP10.65□□□□□ -0.7
CD48-202ENST00000368046 KCNB1Q14721 858 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 CTXN3Q4LDR2 81 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 TPGS2Q68CL5 300 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 USP37Q86T82 979 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 RNF135Q8IUD6 432 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 CBWD2Q8IUF1 395 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 EFCAB13Q8IY85 973 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 KIAA0895Q8NCT3 520 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 TMEM174Q8WUU8 243 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 BORCS6Q96GS4 357 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 TIGD1Q96MW7 591 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 PRKD2Q9BZL6 878 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 POMKQ9H5K3 350 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 PDE11AQ9HCR9 933 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 CHMP5Q9NZZ3 219 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 CDH22Q9UJ99 828 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms