RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 OR2W6PQ8NHA6 318 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 ETNPPLQ8TBG4 499 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 ADAMTS19Q8TE59 1207 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 AFG1LQ8WV93 481 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 SLCO2A1Q92959 643 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 IWS1Q96ST2 819 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 AP1M1Q9BXS5 423 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 EPB41L4BQ9H329 900 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 CENPHQ9H3R5 247 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 TUFT1Q9NNX1 390 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 KCND2Q9NZV8 630 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 SAMD15Q9P1V8 674 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 TPX2Q9ULW0 747 aaKnown RBP12.31□□□□□ -0.44
USF1-201ENST00000368019 USP20Q9Y2K6 914 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 MTCH2Q9Y6C9 303 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 EPOPA6NHQ4 379 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 RFXAPO00287 272 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 O00370 1275 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 BUB1BO60566 1050 aaPredicted RBP12.3□□□□□ -0.44
USF1-201ENST00000368019 TBCAO75347 108 aaKnown RBP12.3□□□□□ -0.44
USF1-201ENST00000368019 GH1P01241 217 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 FGGP02679 453 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 MMP3P08254 477 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 CYP3A4P08684 503 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 BMP1P13497 986 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 ITGA4P13612 1032 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 ALADP13716 330 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 CTNNA2P26232 953 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 TMOD1P28289 359 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 FLT3P36888 993 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 SREBF1P36956 1147 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 PTGIRP43119 386 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 RNASE9P60153 205 aaKnown RBP12.3□□□□□ -0.44
USF1-201ENST00000368019 GHRHRQ02643 423 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 TAP1Q03518 808 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 TRAF1Q13077 416 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 UBE2SQ16763 222 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 LY6KQ17RY6 165 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 QRICH1Q2TAL8 776 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 GDF6Q6KF10 455 aaPredicted RBP12.3□□□□□ -0.44
USF1-201ENST00000368019 TLDC1Q6P9B6 456 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 ZDHHC24Q6UX98 284 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 FAM228AQ86W67 206 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 CATSPER3Q86XQ3 398 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 JAMLQ86YT9 394 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 SLC9A9Q8IVB4 645 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 HERC6Q8IVU3 1022 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 UBL4BQ8N7F7 174 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 MAB21L3Q8N8X9 362 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 NSUN6Q8TEA1 469 aaKnown RBP12.3□□□□□ -0.44
USF1-201ENST00000368019 DHX38Q92620 1227 aaKnown RBP12.3□□□□□ -0.44
USF1-201ENST00000368019 ANKRD27Q96NW4 1050 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 REEP2Q9BRK0 252 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 CD248Q9HCU0 757 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 BATF3Q9NR55 127 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 TBC1D7Q9P0N9 293 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 TRPC6Q9Y210 931 aa12.3□□□□□ -0.44
USF1-201ENST00000368019 OPLAHO14841 1288 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 PMM2O15305 246 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 RGS16O15492 202 aaPredicted RBP12.29□□□□□ -0.44
USF1-201ENST00000368019 BAIAP3O94812 1187 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 OAS1P00973 400 aaKnown RBP12.29□□□□□ -0.44
USF1-201ENST00000368019 MMEP08473 750 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 SPATA31C1P0DKV0 1188 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 CHRM1P11229 460 aaPredicted RBP12.29□□□□□ -0.44
USF1-201ENST00000368019 RARGP13631 454 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 CHN1P15882 459 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 FMO5P49326 533 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 PDE6CP51160 858 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 MCCD1P59942 119 aaPredicted RBP12.29□□□□□ -0.44
USF1-201ENST00000368019 ELF3P78545 371 aaPredicted RBP12.29□□□□□ -0.44
USF1-201ENST00000368019 STXBP2Q15833 593 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 SEPT14Q6ZU15 432 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 TRMT10CQ7L0Y3 403 aaKnown RBP12.29□□□□□ -0.44
USF1-201ENST00000368019 MCF2L2Q86YR7 1114 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 CCDC63Q8NA47 563 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 SLC35G2Q8TBE7 412 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 EMID1Q96A84 441 aaPredicted RBP12.29□□□□□ -0.44
USF1-201ENST00000368019 UHRF1Q96T88 793 aaPredicted RBP12.29□□□□□ -0.44
USF1-201ENST00000368019 RMDN3Q96TC7 470 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 EBF2Q9HAK2 575 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 HOMER3Q9NSC5 361 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 HAUS2Q9NVX0 235 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 DMAC2Q9NW81 257 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.29□□□□□ -0.44
USF1-201ENST00000368019 GRHL1Q9NZI5 618 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 BCCIPQ9P287 314 aaKnown RBP eCLIP12.29□□□□□ -0.44
USF1-201ENST00000368019 ATP8A1Q9Y2Q0 1164 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 CEP83Q9Y592 693 aa12.29□□□□□ -0.44
USF1-201ENST00000368019 COL4A4P53420 1690 aaPredicted RBP12.29□□□□□ -0.44
USF1-201ENST00000368019 HAS3O00219 553 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 MAPK13O15264 365 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 CAND2O75155 1236 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 CXCL10P02778 98 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 HOXD8P13378 290 aaPredicted RBP12.28□□□□□ -0.44
USF1-201ENST00000368019 TNFAIP3P21580 790 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 HSD17B4P51659 736 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 CASP5P51878 434 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 ARHGAP4P98171 946 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 ALCAMQ13740 583 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms