RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 WNT7BP56706 349 aa25.88■■□□□ 1.73
PFDN2-201ENST00000368010 LILRA4P59901 499 aa25.88■■□□□ 1.73
PFDN2-201ENST00000368010 SNRPFP62306 86 aaKnown RBP25.88■■□□□ 1.73
PFDN2-201ENST00000368010 TFAMQ00059 246 aaKnown RBP25.88■■□□□ 1.73
PFDN2-201ENST00000368010 OTOP3Q7RTS5 596 aa25.88■■□□□ 1.73
PFDN2-201ENST00000368010 USP37Q86T82 979 aa25.88■■□□□ 1.73
PFDN2-201ENST00000368010 ZNF461Q8TAF7 563 aa25.88■■□□□ 1.73
PFDN2-201ENST00000368010 SLC7A14Q8TBB6 771 aa25.88■■□□□ 1.73
PFDN2-201ENST00000368010 ACSF2Q96CM8 615 aaPredicted RBP25.88■■□□□ 1.73
PFDN2-201ENST00000368010 GOLPH3LQ9H4A5 285 aa25.88■■□□□ 1.73
PFDN2-201ENST00000368010 KIAA1586Q9HCI6 787 aa25.88■■□□□ 1.73
PFDN2-201ENST00000368010 HSPBP1Q9NZL4 362 aa25.88■■□□□ 1.73
PFDN2-201ENST00000368010 TIMM13Q9Y5L4 95 aaPredicted RBP25.88■■□□□ 1.73
PFDN2-201ENST00000368010 CLUHO75153 1309 aa25.88■■□□□ 1.73
PFDN2-201ENST00000368010 ARHGEF37A1IGU5 675 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 WDR27A2RRH5 827 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 ZNF233A6NK53 670 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 TGFB1I1O43294 461 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 ODC1P11926 461 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 PSMD2Q13200 908 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 UVSSAQ2YD98 709 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 KMT5BQ4FZB7 885 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 KRBA2Q6ZNG9 492 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 RTL10Q7L3V2 364 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 ZDHHC14Q8IZN3 488 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 PLCD3Q8N3E9 789 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 CACTINQ8WUQ7 758 aaKnown RBP25.87■■□□□ 1.73
PFDN2-201ENST00000368010 SENP8Q96LD8 212 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 OXCT2Q9BYC2 517 aaPredicted RBP25.87■■□□□ 1.73
PFDN2-201ENST00000368010 DENND4AQ7Z401 1863 aa25.87■■□□□ 1.73
PFDN2-201ENST00000368010 TCHHQ07283 1943 aa25.86■■□□□ 1.73
PFDN2-201ENST00000368010 MTCL1Q9Y4B5 1905 aaKnown RBP25.86■■□□□ 1.73
PFDN2-201ENST00000368010 SPTLC1O15269 473 aa25.86■■□□□ 1.73
PFDN2-201ENST00000368010 OAZ2O95190 189 aa25.86■■□□□ 1.73
PFDN2-201ENST00000368010 TYMPP19971 482 aa25.86■■□□□ 1.73
PFDN2-201ENST00000368010 ELF1P32519 619 aa25.86■■□□□ 1.73
PFDN2-201ENST00000368010 TAF6P49848 677 aa25.86■■□□□ 1.73
PFDN2-201ENST00000368010 TMEM31Q5JXX7 168 aa25.86■■□□□ 1.73
PFDN2-201ENST00000368010 CBWD2Q8IUF1 395 aa25.86■■□□□ 1.73
PFDN2-201ENST00000368010 PDE11AQ9HCR9 933 aa25.86■■□□□ 1.73
PFDN2-201ENST00000368010 GOLGA6L4A6NEF3 574 aa25.85■■□□□ 1.73
PFDN2-201ENST00000368010 XYLBO75191 536 aa25.85■■□□□ 1.73
PFDN2-201ENST00000368010 ABLIM3O94929 683 aa25.85■■□□□ 1.73
PFDN2-201ENST00000368010 STK4Q13043 487 aa25.85■■□□□ 1.73
PFDN2-201ENST00000368010 SURF1Q15526 300 aa25.85■■□□□ 1.73
PFDN2-201ENST00000368010 PTPN21Q16825 1174 aa25.85■■□□□ 1.73
PFDN2-201ENST00000368010 KNOP1Q1ED39 458 aaKnown RBP25.85■■□□□ 1.73
PFDN2-201ENST00000368010 TPGS2Q68CL5 300 aa25.85■■□□□ 1.73
PFDN2-201ENST00000368010 KIAA0895Q8NCT3 520 aa25.85■■□□□ 1.73
PFDN2-201ENST00000368010 CCDC47Q96A33 483 aaKnown RBP25.85■■□□□ 1.73
PFDN2-201ENST00000368010 CCDC34Q96HJ3 373 aa25.85■■□□□ 1.73
PFDN2-201ENST00000368010 ZNF560Q96MR9 790 aa25.85■■□□□ 1.73
PFDN2-201ENST00000368010 CGNQ9P2M7 1197 aaKnown RBP25.85■■□□□ 1.73
PFDN2-201ENST00000368010 POLIQ9UNA4 740 aa25.85■■□□□ 1.73
PFDN2-201ENST00000368010 C2orf16Q68DN1 1984 aa25.85■■□□□ 1.73
PFDN2-201ENST00000368010 CLIC2O15247 247 aa25.84■■□□□ 1.73
PFDN2-201ENST00000368010 CCL16O15467 120 aa25.84■■□□□ 1.73
PFDN2-201ENST00000368010 GPR37L1O60883 481 aa25.84■■□□□ 1.73
PFDN2-201ENST00000368010 ZNF202O95125 648 aa25.84■■□□□ 1.73
PFDN2-201ENST00000368010 RPN1P04843 607 aaKnown RBP25.84■■□□□ 1.73
PFDN2-201ENST00000368010 POU2F2P09086 479 aa25.84■■□□□ 1.73
PFDN2-201ENST00000368010 PRR29P0C7W0 189 aa25.84■■□□□ 1.73
PFDN2-201ENST00000368010 CPB1P15086 417 aa25.84■■□□□ 1.73
PFDN2-201ENST00000368010 ATF2P15336 505 aa25.84■■□□□ 1.73
PFDN2-201ENST00000368010 SV2CQ496J9 727 aa25.84■■□□□ 1.73
PFDN2-201ENST00000368010 OVOS1Q6IE37 1185 aa25.84■■□□□ 1.73
PFDN2-201ENST00000368010 C11orf16Q9NQ32 467 aa25.84■■□□□ 1.73
PFDN2-201ENST00000368010 FAM86C2PA6NEL3 165 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 OR6C75A6NL08 312 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 PRRG1O14668 218 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 ITGB3P05106 788 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 TMEM191BP0C7N4 346 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 POLR2BP30876 1174 aaKnown RBP25.83■■□□□ 1.73
PFDN2-201ENST00000368010 PNPLA4P41247 253 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 CYP2J2P51589 502 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 C12orf56Q8IXR9 622 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 C1orf127Q8N9H9 656 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 XXYLT1Q8NBI6 393 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 GOLGA5Q8TBA6 731 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 EDAQ92838 391 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 CYP4F11Q9HBI6 524 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 ITGA11Q9UKX5 1188 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 DSEQ9UL01 958 aa25.83■■□□□ 1.73
PFDN2-201ENST00000368010 GBP2P32456 591 aaPredicted RBP25.82■■□□□ 1.72
PFDN2-201ENST00000368010 SNRNP35Q16560 246 aaKnown RBP25.82■■□□□ 1.72
PFDN2-201ENST00000368010 GRASPQ7Z6J2 395 aaPredicted RBP25.82■■□□□ 1.72
PFDN2-201ENST00000368010 ANKRD36BP1Q96IX9 119 aa25.82■■□□□ 1.72
PFDN2-201ENST00000368010 MTMR12Q9C0I1 747 aa25.82■■□□□ 1.72
PFDN2-201ENST00000368010 AFF4Q9UHB7 1163 aaKnown RBP25.82■■□□□ 1.72
PFDN2-201ENST00000368010 MAFFQ9ULX9 164 aa25.82■■□□□ 1.72
PFDN2-201ENST00000368010 AGAP1Q9UPQ3 857 aa25.82■■□□□ 1.72
PFDN2-201ENST00000368010 KPNA7A9QM74 516 aa25.81■■□□□ 1.72
PFDN2-201ENST00000368010 CYB561D2O14569 222 aa25.81■■□□□ 1.72
PFDN2-201ENST00000368010 LRG1P02750 347 aa25.81■■□□□ 1.72
PFDN2-201ENST00000368010 CYP11A1P05108 521 aa25.81■■□□□ 1.72
PFDN2-201ENST00000368010 ZXDAP98168 799 aa25.81■■□□□ 1.72
PFDN2-201ENST00000368010 DPYDQ12882 1025 aa25.81■■□□□ 1.72
PFDN2-201ENST00000368010 GET4Q7L5D6 327 aaPredicted RBP25.81■■□□□ 1.72
PFDN2-201ENST00000368010 METTL23Q86XA0 190 aa25.81■■□□□ 1.72
PFDN2-201ENST00000368010 TCEAL8Q8IYN2 117 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms