RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 RASA1P20936 1047 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 RFTN2Q52LD8 501 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SENP7Q9BQF6 1050 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 MAN1B1Q9UKM7 699 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SRPRBQ9Y5M8 271 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 NEXMIFQ5QGS0 1516 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 UPP2O95045 317 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 GMFBP60983 142 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 CEP55Q53EZ4 464 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 EPM2AIP1Q7L775 607 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SPICE1Q8N0Z3 855 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 M0QX08 132 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 NDUFA10O95299 355 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ZMYM1Q5SVZ6 1142 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 BORCS5Q969J3 196 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ANKRD36BP1Q96IX9 119 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SUN2Q9UH99 717 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 PGAP1Q75T13 922 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 C10orf107Q8IVU9 208 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 GANQ9H2C0 597 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 UGGT1Q9NYU2 1555 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 TMEM247A6NEH6 219 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 NMT2O60551 498 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 B3GALNT1O75752 331 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 GJA8P48165 433 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 DR1Q01658 176 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 DPYDQ12882 1025 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 LRRC24Q50LG9 513 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 GSTA5Q7RTV2 222 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 NELFCDQ8IXH7 590 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SETD4Q9NVD3 440 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 THUMPD1Q9NXG2 353 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 MED7O43513 233 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 FCER2P06734 321 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 PMS2P54278 862 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 VCPP55072 806 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 KBTBD8Q8NFY9 601 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 MYPNQ86TC9 1320 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 A0A0B4J269 797 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 L1CAMP32004 1257 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 TUBB3Q13509 450 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 BNC2Q6ZN30 1099 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 C14orf80Q86SX3 495 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 TBC1D1Q86TI0 1168 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 TRIM10Q9UDY6 481 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 FOSL1P15407 271 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 TPP2P29144 1249 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PACS1Q6VY07 963 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CAMK1DQ8IU85 385 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 C12orf66Q96MD2 445 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 NLRP3Q96P20 1036 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 FN3KQ9H479 309 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 KCNK4Q9NYG8 393 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ANAPC7Q9UJX3 599 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 NPIPA7E9PJI5 369 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PSTPIP1O43586 416 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 IDH1O75874 414 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 FAM200BP0CF97 657 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 NPIPA8P0DM63 369 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 KRT76Q01546 638 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ZNF268Q14587 947 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 TRIM68Q6AZZ1 485 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 NSMCE1Q8WV22 266 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 RAB20Q9NX57 234 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ZCCHC18P0CG32 403 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ERGIC2Q96RQ1 377 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 KRCC1Q9NPI7 259 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ADGRF5Q8IZF2 1346 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PCF11O94913 1555 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 A0A0A0MRY4 1105 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SFI1A8K8P3 1242 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 STAM2O75886 525 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CDC25CP30307 473 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 EIF4A2Q14240 407 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 C11orf63Q6NUN7 778 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ZNF544Q6NX49 715 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ZNF594Q96JF6 807 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PSMC3IPQ9P2W1 217 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CNOT11Q9UKZ1 510 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SCRN1Q12765 414 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 EFTUD2Q15029 972 aaKnown RBP eCLIP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 TTC6Q86TZ1 520 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 NUP93Q8N1F7 819 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 RBM15BQ8NDT2 890 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 UCMAQ8WVF2 138 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ASPSCR1Q9BZE9 553 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 LNPEPQ9UIQ6 1025 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CENPXA8MT69 81 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CHKAP35790 457 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 MCL1Q07820 350 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 MMRN1Q13201 1228 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 KCTD16Q68DU8 428 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CEP170P1Q96L14 293 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 AGXT2Q9BYV1 514 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 KCNJ14Q9UNX9 436 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SMIM11AP58511 58 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 TRIM28Q13263 835 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 NAALADL2Q58DX5 795 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms