RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 FBXW11Q9UKB1 542 aa18.29■□□□□ 0.52
CKLF-204ENST00000362093 CDY1Q9Y6F8 540 aa18.29■□□□□ 0.52
CKLF-204ENST00000362093 CCDC195A0A1B0GUA6 201 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 LOC730098B7Z3J9 87 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 GADD45BO75293 160 aaPredicted RBP18.28■□□□□ 0.52
CKLF-204ENST00000362093 TYMPP19971 482 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 CYP2J2P51589 502 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 PNOCQ13519 176 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 SNRNP35Q16560 246 aaKnown RBP18.28■□□□□ 0.52
CKLF-204ENST00000362093 SCARA3Q6AZY7 606 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 CYP26C1Q6V0L0 522 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 SLC9A9Q8IVB4 645 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 C1orf127Q8N9H9 656 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 GOLGA5Q8TBA6 731 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 SENP8Q96LD8 212 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 POP1Q99575 1024 aaKnown RBP18.28■□□□□ 0.52
CKLF-204ENST00000362093 POMKQ9H5K3 350 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 INTS13Q9NVM9 706 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 ZDHHC7Q9NXF8 308 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 FBXL5Q9UKA1 691 aa18.28■□□□□ 0.52
CKLF-204ENST00000362093 TIMM13Q9Y5L4 95 aaPredicted RBP18.28■□□□□ 0.52
CKLF-204ENST00000362093 MTCL1Q9Y4B5 1905 aaKnown RBP18.27■□□□□ 0.52
CKLF-204ENST00000362093 SPDYE4A6NLX3 237 aa18.27■□□□□ 0.52
CKLF-204ENST00000362093 PDXKO00764 312 aa18.27■□□□□ 0.52
CKLF-204ENST00000362093 RFPL2O75678 378 aa18.27■□□□□ 0.52
CKLF-204ENST00000362093 ZMYND10O75800 440 aa18.27■□□□□ 0.52
CKLF-204ENST00000362093 ABLIM3O94929 683 aa18.27■□□□□ 0.52
CKLF-204ENST00000362093 YWHAHQ04917 246 aaPredicted RBP18.27■□□□□ 0.52
CKLF-204ENST00000362093 CYP24A1Q07973 514 aa18.27■□□□□ 0.52
CKLF-204ENST00000362093 CTXN3Q4LDR2 81 aa18.27■□□□□ 0.52
CKLF-204ENST00000362093 ZNF461Q8TAF7 563 aa18.27■□□□□ 0.52
CKLF-204ENST00000362093 SPATA20Q8TB22 786 aa18.27■□□□□ 0.52
CKLF-204ENST00000362093 ZNF707Q96C28 371 aaPredicted RBP18.27■□□□□ 0.52
CKLF-204ENST00000362093 FAM84AQ96KN4 292 aa18.27■□□□□ 0.52
CKLF-204ENST00000362093 MFSD14AQ96MC6 490 aa18.27■□□□□ 0.52
CKLF-204ENST00000362093 TRAF3IP3Q9Y228 551 aa18.27■□□□□ 0.52
CKLF-204ENST00000362093 TULP1O00294 542 aaPredicted RBP18.26■□□□□ 0.51
CKLF-204ENST00000362093 KIF20AO95235 890 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 ITGB3P05106 788 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 CYP11A1P05108 521 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 SSTR3P32745 418 aaPredicted RBP18.26■□□□□ 0.51
CKLF-204ENST00000362093 TAF6P49848 677 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 ROR1Q01973 937 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 MYBPC2Q14324 1141 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 PSMD6Q15008 389 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 UVSSAQ2YD98 709 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 ZNF280DQ6N043 979 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 GUF1Q8N442 669 aaKnown RBP18.26■□□□□ 0.51
CKLF-204ENST00000362093 CSGALNACT2Q8N6G5 542 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 OR5B17Q8NGF7 314 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 GSDMAQ96QA5 445 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 OXCT2Q9BYC2 517 aaPredicted RBP18.26■□□□□ 0.51
CKLF-204ENST00000362093 PRKD2Q9BZL6 878 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 SIX4Q9UIU6 781 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 ITGA11Q9UKX5 1188 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 AGAP1Q9UPQ3 857 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 PCDHA5Q9Y5H7 936 aa18.26■□□□□ 0.51
CKLF-204ENST00000362093 PTPRJQ12913 1337 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 SCN1AP35498 2009 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 WDR27A2RRH5 827 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 KPNA7A9QM74 516 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 EXOC3O60645 756 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 POLR2BP30876 1174 aaKnown RBP18.25■□□□□ 0.51
CKLF-204ENST00000362093 PNPLA4P41247 253 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 RBP5P82980 135 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 DUOXA2Q1HG44 320 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 LMBRD2Q68DH5 695 aaPredicted RBP18.25■□□□□ 0.51
CKLF-204ENST00000362093 RTL10Q7L3V2 364 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 USP37Q86T82 979 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 WDR49Q8IV35 697 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 KHSRPQ92945 711 aaKnown RBP eCLIP18.25■□□□□ 0.51
CKLF-204ENST00000362093 ANKRD36BP1Q96IX9 119 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 RPGRIP1Q96KN7 1286 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 ZNF560Q96MR9 790 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 MTMR12Q9C0I1 747 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 GZF1Q9H116 711 aaPredicted RBP18.25■□□□□ 0.51
CKLF-204ENST00000362093 MAPK8IP1Q9UQF2 711 aa18.25■□□□□ 0.51
CKLF-204ENST00000362093 C5orf42Q9H799 3197 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 ARHGEF37A1IGU5 675 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 CYB561D2O14569 222 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 PRPF40AO75400 957 aaKnown RBP18.24■□□□□ 0.51
CKLF-204ENST00000362093 NR3C1P04150 777 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 C8AP07357 584 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 HNRNPA1P09651 372 aaKnown RBP eCLIP18.24■□□□□ 0.51
CKLF-204ENST00000362093 TMEM191BP0C7N4 346 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 ODC1P11926 461 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 ATF2P15336 505 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 HOXA9P31269 272 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 ARPP19P56211 112 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 NFIL3Q16649 462 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 SV2CQ496J9 727 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 TPGS2Q68CL5 300 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 OVOS1Q6IE37 1185 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 LRRC52Q8N7C0 313 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 SMG7Q92540 1137 aaKnown RBP18.24■□□□□ 0.51
CKLF-204ENST00000362093 ZNF516Q92618 1163 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 ERCC4Q92889 916 aaPredicted RBP18.24■□□□□ 0.51
CKLF-204ENST00000362093 FNBP1Q96RU3 617 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 CGRRF1Q99675 332 aa18.24■□□□□ 0.51
CKLF-204ENST00000362093 WDR6Q9NNW5 1121 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms