RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 RIT2Q99578 217 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 WHRNQ9P202 907 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 TCEAL9Q9UHQ7 104 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 H0Y3Z8 333 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 CBX6O95503 412 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 RFX1P22670 979 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 ZNF280AP59817 542 aaPredicted RBP11.23□□□□□ -0.61
SMC3-201ENST00000361804 DYNLT1P63172 113 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 TMEM270Q6UE05 265 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 ZNF365Q70YC5 407 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 CHURC1Q8WUH1 139 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
SMC3-201ENST00000361804 SERPINB12Q96P63 405 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 TMEM8AQ9HCN3 771 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 ADAM22Q9P0K1 906 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 HERC5Q9UII4 1024 aaKnown RBP11.23□□□□□ -0.61
SMC3-201ENST00000361804 GGPS1O95749 300 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 IFNB1P01574 187 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 TNNI1P19237 187 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 NLRP11P59045 1033 aaKnown RBP11.23□□□□□ -0.61
SMC3-201ENST00000361804 CYP24A1Q07973 514 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 PTK6Q13882 451 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 SYTL5Q8TDW5 730 aaPredicted RBP11.23□□□□□ -0.61
SMC3-201ENST00000361804 CNKSR1Q969H4 720 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 PITPNM3Q9BZ71 974 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 KCND2Q9NZV8 630 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 UVRAGQ9P2Y5 699 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 ZSWIM8A7E2V4 1837 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 ITIH2P19823 946 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 RPA3P35244 121 aaPredicted RBP11.23□□□□□ -0.61
SMC3-201ENST00000361804 MSH2P43246 934 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 OVGP1Q12889 678 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 PCNX4Q63HM2 1172 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 TAS1R3Q7RTX0 852 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 CEP170P1Q96L14 293 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 OSBPL8Q9BZF1 889 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 ATP6V0A4Q9HBG4 840 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 APOBEC3GQ9HC16 384 aaKnown RBP11.23□□□□□ -0.61
SMC3-201ENST00000361804 ARL2BPQ9Y2Y0 163 aa11.23□□□□□ -0.61
SMC3-201ENST00000361804 KAT6AQ92794 2004 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 GM2AP17900 193 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 SLC8A1P32418 973 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 GPC3P51654 580 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 NCKAP1LP55160 1127 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 SLC1A5Q15758 541 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 HAPLN2Q9GZV7 340 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 GABBR1Q9UBS5 961 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 PRKAG3Q9UGI9 489 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.22□□□□□ -0.61
SMC3-201ENST00000361804 C15orf41Q9Y2V0 281 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 EXOC1LA0A1B0GW35 172 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 GSTA1P08263 222 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 MAGEA4P43358 317 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 NSFP46459 744 aaKnown RBP11.22□□□□□ -0.61
SMC3-201ENST00000361804 KLF1Q13351 362 aaPredicted RBP11.22□□□□□ -0.61
SMC3-201ENST00000361804 ZNF268Q14587 947 aaPredicted RBP11.22□□□□□ -0.61
SMC3-201ENST00000361804 ZNF526Q8TF50 670 aaPredicted RBP11.22□□□□□ -0.61
SMC3-201ENST00000361804 P3H4Q92791 437 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 TRAIPQ9BWF2 469 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 STMN4Q9H169 189 aaPredicted RBP11.22□□□□□ -0.61
SMC3-201ENST00000361804 GAS8O95995 478 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 PECAM1P16284 738 aaPredicted RBP11.22□□□□□ -0.61
SMC3-201ENST00000361804 DMP1Q13316 513 aaPredicted RBP11.22□□□□□ -0.61
SMC3-201ENST00000361804 TDRD10Q5VZ19 366 aaKnown RBP11.22□□□□□ -0.61
SMC3-201ENST00000361804 TRIM68Q6AZZ1 485 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 ATL2Q8NHH9 583 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 TMEM121Q9BTD3 319 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 ROPN1BQ9BZX4 212 aaPredicted RBP11.22□□□□□ -0.61
SMC3-201ENST00000361804 VPS37BQ9H9H4 285 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 ROPN1Q9HAT0 212 aaPredicted RBP11.22□□□□□ -0.61
SMC3-201ENST00000361804 CHKBQ9Y259 395 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 NEU2Q9Y3R4 380 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 ZNF541Q9H0D2 1346 aa11.22□□□□□ -0.61
SMC3-201ENST00000361804 C2orf71A6NGG8 1288 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 F8VP50 259 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 SMTNL2Q2TAL5 461 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 MFSD7Q6UXD7 560 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 TMEM143Q96AN5 459 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 ZNF668Q96K58 619 aaPredicted RBP11.21□□□□□ -0.61
SMC3-201ENST00000361804 NKIRAS1Q9NYS0 192 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 ANKFY1Q9P2R3 1169 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 ZNF148Q9UQR1 794 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 P4HA2O15460 535 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 NEBLO76041 1014 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 HLA-DRAP01903 254 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 EDN1P05305 212 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 KRT15P19012 456 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 GPS1Q13098 491 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 MAP4K3Q8IVH8 894 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 TMEM174Q8WUU8 243 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 RMDN3Q96TC7 470 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 EBF2Q9HAK2 575 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 KIAA1586Q9HCI6 787 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 TJP2Q9UDY2 1190 aa11.21□□□□□ -0.61
SMC3-201ENST00000361804 TTLL13PA6NNM8 815 aa11.21□□□□□ -0.62
SMC3-201ENST00000361804 TLR3O15455 904 aaKnown RBP11.21□□□□□ -0.62
SMC3-201ENST00000361804 MAMLD1Q13495 774 aa11.21□□□□□ -0.62
SMC3-201ENST00000361804 PGM5Q15124 567 aa11.21□□□□□ -0.62
SMC3-201ENST00000361804 TCEAL1Q15170 157 aa11.21□□□□□ -0.62
SMC3-201ENST00000361804 FKBP1CQ5VVH2 108 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms