RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 ACAP1Q15027 740 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 TMEM119Q4V9L6 283 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 SPDYCQ5MJ68 293 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 LMBRD2Q68DH5 695 aaPredicted RBP13.42□□□□□ -0.26
VAMP1-201ENST00000361716 SDCCAG8Q86SQ7 713 aaPredicted RBP13.42□□□□□ -0.26
VAMP1-201ENST00000361716 CPXCR1Q8N123 301 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 ARHGAP18Q8N392 663 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 ENDOVQ8N8Q3 282 aaKnown RBP13.42□□□□□ -0.26
VAMP1-201ENST00000361716 SLC26A7Q8TE54 656 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 PYDC1Q8WXC3 89 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 TRIM55Q9BYV6 548 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 TYW1Q9NV66 732 aaKnown RBP13.42□□□□□ -0.26
VAMP1-201ENST00000361716 PPP1R1BQ9UD71 204 aaPredicted RBP13.42□□□□□ -0.26
VAMP1-201ENST00000361716 DIS3Q9Y2L1 958 aaKnown RBP13.42□□□□□ -0.26
VAMP1-201ENST00000361716 SPEF2Q9C093 1822 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 CHD4Q14839 1912 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 CCDC195A0A1B0GUA6 201 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 BANF1O75531 89 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 BCRP11274 1271 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 IMPDH2P12268 514 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 PDE1CQ14123 709 aaPredicted RBP13.42□□□□□ -0.26
VAMP1-201ENST00000361716 FRMD5Q7Z6J6 570 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 FBXO11Q86XK2 927 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 APLFQ8IW19 511 aaPredicted RBP13.42□□□□□ -0.26
VAMP1-201ENST00000361716 ZNF75CPQ92670 426 aaPredicted RBP13.42□□□□□ -0.26
VAMP1-201ENST00000361716 DBNDD1Q9H9R9 158 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 CYP4F11Q9HBI6 524 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 DDX4Q9NQI0 724 aaKnown RBP13.42□□□□□ -0.26
VAMP1-201ENST00000361716 AAASQ9NRG9 546 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 TRAF3IP3Q9Y228 551 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 STARD13Q9Y3M8 1113 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 DAGLAQ9Y4D2 1042 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 PCDHAC2Q9Y5I4 1007 aa13.42□□□□□ -0.26
VAMP1-201ENST00000361716 A0A0A6YYK5 440 aaPredicted RBP13.41□□□□□ -0.26
VAMP1-201ENST00000361716 VAV1P15498 845 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 ATF7P17544 494 aaPredicted RBP13.41□□□□□ -0.26
VAMP1-201ENST00000361716 DRG2P55039 364 aaKnown RBP13.41□□□□□ -0.26
VAMP1-201ENST00000361716 GPC5P78333 572 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 AP1B1Q10567 949 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 LLGL2Q6P1M3 1020 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 ZBED8Q8IZ13 594 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 EFCAB3Q8N7B9 438 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 ZNF564Q8TBZ8 553 aaPredicted RBP13.41□□□□□ -0.26
VAMP1-201ENST00000361716 AGBL1Q96MI9 1066 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 TIPINQ9BVW5 301 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 EBF3Q9H4W6 596 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 PARVGQ9HBI0 331 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 SCAF8Q9UPN6 1271 aaKnown RBP13.41□□□□□ -0.26
VAMP1-201ENST00000361716 MEI4A8MW99 385 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 MIF4GDA9UHW6 222 aaKnown RBP13.41□□□□□ -0.26
VAMP1-201ENST00000361716 FAM86B1E9PN63 330 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 EML1O00423 815 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 EDF1O60869 148 aaKnown RBP13.41□□□□□ -0.26
VAMP1-201ENST00000361716 FAM86B2P0C5J1 330 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 HSPA6P17066 643 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 RRM1P23921 792 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 POLD1P28340 1107 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 MAGEA4P43358 317 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 MED21Q13503 144 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 SH2D4BQ5SQS7 431 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 LPCAT4Q643R3 524 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 ZFPM1Q8IX07 1006 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 NME8Q8N427 588 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 AGPAT1Q99943 283 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 TAF1P21675 1872 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 TMEM150BA6NC51 233 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 GYS1P13807 737 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 DLG4P78352 724 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 PPATQ06203 517 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 PPP1R18Q6NYC8 613 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 CLEC4GQ6UXB4 293 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 MARK2Q7KZI7 788 aaKnown RBP13.41□□□□□ -0.26
VAMP1-201ENST00000361716 RHOT2Q8IXI1 618 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 SLFN12Q8IYM2 578 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.41□□□□□ -0.26
VAMP1-201ENST00000361716 ERLEC1Q96DZ1 483 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 PLVAPQ9BX97 442 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 FAM192AQ9GZU8 254 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 KRT82Q9NSB4 513 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 ANKFY1Q9P2R3 1169 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 PCYOX1Q9UHG3 505 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 BLOC1S6Q9UL45 172 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 GRID1Q9ULK0 1009 aa13.41□□□□□ -0.26
VAMP1-201ENST00000361716 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 MYH3P11055 1940 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 RPS6KA4O75676 772 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 ZBTB48P10074 688 aaPredicted RBP13.4□□□□□ -0.26
VAMP1-201ENST00000361716 MMEL1Q495T6 779 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 KCTD21Q4G0X4 260 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 ARHGAP24Q8N264 748 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 USP6NLQ92738 828 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 ARHGEF38Q9NXL2 777 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 ZNF148Q9UQR1 794 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 SPDYE16A6NNV3 312 aaPredicted RBP13.4□□□□□ -0.26
VAMP1-201ENST00000361716 PI4K2BG5E9Z4 385 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 RNASEH1O60930 286 aaKnown RBP13.4□□□□□ -0.26
VAMP1-201ENST00000361716 ZWINTO95229 277 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 SGPL1O95470 568 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 ZSCAN5DPP0CG00 497 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms