RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 ASS1P00966 412 aaKnown RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 AMHP03971 560 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 NBPF20Q3BBV1 942 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 ZNF746Q6NUN9 644 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 NBPF10Q6P3W6 841 aaKnown RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 MB21D2Q8IYB1 491 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 KRT78Q8N1N4 520 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 SHCBP1Q8NEM2 672 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 PIP4K2CQ8TBX8 421 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 ARL8AQ96BM9 186 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 PLEKHA8Q96JA3 519 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 UTP6Q9NYH9 597 aaKnown RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 PLA2G4CQ9UP65 541 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 FAM187AA6NFU0 413 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 F5H5T6 163 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 LRRC74AQ0VAA2 488 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 PIGHQ14442 188 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 PAN2Q504Q3 1202 aaKnown RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 RFFLQ8WZ73 363 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 SNF8Q96H20 258 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 AGPAT1Q99943 283 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 IGSF9BQ9UPX0 1349 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 MAGI3Q5TCQ9 1506 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 DARSP14868 501 aaKnown RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 ZNF280DQ6N043 979 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 UGT3A1Q6NUS8 523 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 SAMD3Q8N6K7 520 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 USP33Q8TEY7 942 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 STX7O15400 261 aaKnown RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 KCNN4O15554 427 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 GARTP22102 1010 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 PRCPP42785 496 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 KPNA1P52294 538 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 SESN2P58004 480 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 KIZQ2M2Z5 673 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 EFL1Q7Z2Z2 1120 aaKnown RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 BTN2A2Q8WVV5 523 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 SLC39A10Q9ULF5 831 aa11.49□□□□□ -0.57
CLIP1-203ENST00000361654 MORC2Q9Y6X9 1032 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-203ENST00000361654 XYLBO75191 536 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 B3GAT3O94766 335 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ALOX15P16050 662 aaPredicted RBP11.48□□□□□ -0.57
CLIP1-203ENST00000361654 IGFBP4P22692 258 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 NMT1P30419 496 aaKnown RBP11.48□□□□□ -0.57
CLIP1-203ENST00000361654 TCF7P36402 384 aaPredicted RBP11.48□□□□□ -0.57
CLIP1-203ENST00000361654 RAP1GDS1P52306 607 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ZBTB17Q13105 803 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 PTK6Q13882 451 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ZNF284Q2VY69 593 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 SGMS1Q86VZ5 419 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 HOMEZQ8IX15 550 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ZBED8Q8IZ13 594 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 SENP7Q9BQF6 1050 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 COPS7BQ9H9Q2 264 aaPredicted RBP11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ADA2Q9NZK5 511 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 CD274Q9NZQ7 290 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 DTNAQ9Y4J8 743 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ANO9A1A5B4 782 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ATP5HO75947 161 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 CDH2P19022 906 aaPredicted RBP11.48□□□□□ -0.57
CLIP1-203ENST00000361654 MUTP22033 750 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 CTXN3Q4LDR2 81 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 TMCO5AQ8N6Q1 288 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 RBBP8NLQ8NC74 664 aaPredicted RBP11.48□□□□□ -0.57
CLIP1-203ENST00000361654 MRGBPQ9NV56 204 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 H2AFY2Q9P0M6 372 aaPredicted RBP11.48□□□□□ -0.57
CLIP1-203ENST00000361654 MAP10Q9P2G4 905 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 WARS2Q9UGM6 360 aaKnown RBP11.48□□□□□ -0.57
CLIP1-203ENST00000361654 SAMD9LQ8IVG5 1584 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 CAMTA2O94983 1202 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 NR1D1P20393 614 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 PDIA6Q15084 440 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ZNF34Q8IZ26 560 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 LRRC71Q8N4P6 559 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 LINC00116Q8NCU8 138 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 CSGALNACT1Q8TDX6 532 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 OSCP1Q8WVF1 389 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 FBXO32Q969P5 355 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 UVRAGQ9P2Y5 699 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 SPATA31A5Q5VU36 1347 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 SPATA31A7Q8IWB4 1347 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 FRMD3A2A2Y4 597 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ANGPT2O15123 496 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 CYP26A1O43174 497 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 GUCA1CO95843 209 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ERVK-10P10266 1014 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 TCF3P15923 654 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 GRK3P35626 688 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 SNRNP35Q16560 246 aaKnown RBP11.48□□□□□ -0.57
CLIP1-203ENST00000361654 COBLL1Q53SF7 1204 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 TJAP1Q5JTD0 557 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 C16orf86Q6ZW13 317 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 HTATIP2Q9BUP3 242 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 WDR41Q9HAD4 459 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ZSCAN32Q9NX65 697 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ZDHHC9Q9Y397 364 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 TRIM17Q9Y577 477 aa11.48□□□□□ -0.57
CLIP1-203ENST00000361654 ZC3H11AO75152 810 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLIP1-203ENST00000361654 ALDH2P05091 517 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 NCAM1P13591 858 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms