RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 OASLQ15646 514 aaKnown RBP13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 PKN2Q16513 984 aaKnown RBP13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 ARMC4Q5T2S8 1044 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 ZNF772Q68DY9 489 aaPredicted RBP13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 PPP1R18Q6NYC8 613 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 ZNF438Q7Z4V0 828 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 EYA1Q99502 592 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 C1orf232A0A0U1RR37 186 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 POTEEQ6S8J3 1075 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 PIGOQ8TEQ8 1089 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 MIEF2Q96C03 454 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 ANKRD27Q96NW4 1050 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 CCT8P50990 548 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 COPAP53621 1224 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 CDK17Q00537 523 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 DCTN2Q13561 401 aaKnown RBP13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 SPDYAQ5MJ70 313 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 CCNI2Q6ZMN8 369 aaPredicted RBP13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 C4orf33Q8N1A6 199 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 SSH3Q8TE77 659 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 DCAF4Q8WV16 495 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 TIPINQ9BVW5 301 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 DDX18Q9NVP1 670 aaKnown RBP13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 NCF4Q15080 339 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 EZH2Q15910 746 aaKnown RBP13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 KCNF1Q9H3M0 494 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 DCLRE1BQ9H816 532 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 IMPAD1Q9NX62 359 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 GMEB1Q9Y692 573 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 AP1G2O75843 785 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 VCLP18206 1134 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 STILQ15468 1287 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 FAM45BPQ6NSW5 357 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 IL1RL2Q9HB29 575 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 PLEKHG2Q9H7P9 1386 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 MTSS1O43312 755 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 LCA5LO95447 670 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 IRAK1BP1Q5VVH5 260 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 OR6P1Q8NGX9 317 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 KRT84Q9NSB2 600 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 EVPLLA8MZ36 301 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 ADAM33Q9BZ11 813 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 PAIP1Q9H074 479 aaKnown RBP13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 ENOPH1Q9UHY7 261 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 CACNA1FO60840 1977 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 ERN1O75460 977 aaKnown RBP13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 BCL10O95999 233 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 ARHGEF7Q14155 803 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 KCTD21Q4G0X4 260 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 C4orf22Q6V702 233 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 EAF2Q96CJ1 260 aaPredicted RBP13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 MRPL4Q9BYD3 311 aaKnown RBP13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 PRCPP42785 496 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 FTLP02792 175 aaPredicted RBP13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 OR2W6PQ8NHA6 318 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 ZIM3Q96PE6 472 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 MANSC1Q9H8J5 431 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 STK39Q9UEW8 545 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 SYNMO15061 1565 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 MAPK11Q15759 364 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 PPP1R14BQ96C90 147 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 MTA3Q9BTC8 594 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 CEP44Q9C0F1 390 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 USP44Q9H0E7 712 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 ZCWPW1Q9H0M4 648 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 GPR108Q9NPR9 543 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 SLC9A2Q9UBY0 812 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 ZC3H7BQ9UGR2 993 aaKnown RBP13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 MYO18AQ92614 2054 aaKnown RBP13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 PIPSLA2A3N6 862 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 ATP9AO75110 1047 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 CACNA2D1P54289 1103 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 PREPLQ4J6C6 727 aaPredicted RBP13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 APOBEC3FQ8IUX4 373 aaKnown RBP13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 SCN4BQ8IWT1 228 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 PPP1R14AQ96A00 147 aa13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 FHDC1Q9C0D6 1143 aaPredicted RBP13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 MRPL39Q9NYK5 338 aaKnown RBP13.79□□□□□ -0.2
SRGAP3-201ENST00000360413 ZC3H4Q9UPT8 1303 aaKnown RBP13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 CROCCQ5TZA2 2017 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 CHL1O00533 1208 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 SPAG6O75602 509 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 STAT3P40763 770 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 SKP1P63208 163 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 UBASH3BQ8TF42 649 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 SEPT1Q8WYJ6 367 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 RBBP8Q99708 897 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 PIGUQ9H490 435 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 A0A1W2PP64 1363 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 TTC26A0AVF1 554 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 AHCYL1O43865 530 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 H2AFYO75367 372 aaKnown RBP13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 RMND5BQ96G75 393 aaPredicted RBP13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 F8VZ95 297 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 ATP6V1G2O95670 118 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 PLA2G4AP47712 749 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 C21orf59P57076 290 aa13.78□□□□□ -0.2
SRGAP3-201ENST00000360413 OSTNP61366 133 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms