RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 FBXO16Q8IX29 292 aaPredicted RBP11.85□□□□□ -0.51
SSU72-202ENST00000359060 PLCD3Q8N3E9 789 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 CCDC63Q8NA47 563 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 HELQQ8TDG4 1101 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 CFAP57Q96MR6 1250 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 TRAIPQ9BWF2 469 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 DNAI2Q9GZS0 605 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 NIF3L1Q9GZT8 377 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 C2orf40Q9H1Z8 148 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 COX16Q9P0S2 106 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 KLHL14Q9P2G3 628 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 KCNA2P16389 499 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 UBA1P22314 1058 aaKnown RBP11.85□□□□□ -0.51
SSU72-202ENST00000359060 YWHAGP61981 247 aaKnown RBP eCLIP11.85□□□□□ -0.51
SSU72-202ENST00000359060 IFI35P80217 286 aaPredicted RBP11.85□□□□□ -0.51
SSU72-202ENST00000359060 MXD4Q14582 209 aaPredicted RBP11.85□□□□□ -0.51
SSU72-202ENST00000359060 TTLL4Q14679 1199 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 PSMD6Q15008 389 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 SGSM1Q2NKQ1 1148 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 ATF7IP2Q5U623 682 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 EFCAB12Q6NXP0 572 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 PPP1R14CQ8TAE6 165 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 ZNF606Q8WXB4 792 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 CGRRF1Q99675 332 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 SH3GL2Q99962 352 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 SPATC1LQ9H0A9 340 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 CDC42EP4Q9H3Q1 356 aaKnown RBP11.85□□□□□ -0.51
SSU72-202ENST00000359060 XPNPEP1Q9NQW7 623 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 WNK3Q9BYP7 1800 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 SMCHD1A6NHR9 2005 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 WDR91A4D1P6 747 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 TOM1L1O75674 476 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 SUN1O94901 812 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 PROSCO94903 275 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 AGTP01019 485 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 CHRNB2P17787 502 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 CA4P22748 312 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 ALDH5A1P51649 535 aaPredicted RBP11.85□□□□□ -0.51
SSU72-202ENST00000359060 ZBTB41Q5SVQ8 909 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 IER5Q5VY09 327 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 DUPD1Q68J44 220 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 DARS2Q6PI48 645 aaKnown RBP11.85□□□□□ -0.51
SSU72-202ENST00000359060 ARMC9Q7Z3E5 817 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 EXOC8Q8IYI6 725 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 ZBED8Q8IZ13 594 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 ABRAQ8N0Z2 381 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 SMC6Q96SB8 1091 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 MCF2LO15068 1137 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 OGTO15294 1046 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 PHKA2P46019 1235 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 NFX1Q12986 1120 aaKnown RBP11.84□□□□□ -0.51
SSU72-202ENST00000359060 KCNT1Q5JUK3 1230 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 FAM102AQ5T9C2 384 aaPredicted RBP11.84□□□□□ -0.51
SSU72-202ENST00000359060 GIMAP7Q8NHV1 300 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 PYROXD1Q8WU10 500 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 P3H4Q92791 437 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 SLC10A4Q96EP9 437 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 SEC16BQ96JE7 1060 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 DDX23Q9BUQ8 820 aaKnown RBP11.84□□□□□ -0.51
SSU72-202ENST00000359060 MTFR1LQ9H019 292 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.84□□□□□ -0.51
SSU72-202ENST00000359060 NFKBIEO00221 500 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 MAPK13O15264 365 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 SPAG7O75391 227 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 RARGP13631 454 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 OAZ1P54368 228 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 ZACNQ401N2 412 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 DCAF12L1Q5VU92 463 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 HIBCHQ6NVY1 386 aaPredicted RBP11.84□□□□□ -0.51
SSU72-202ENST00000359060 CASC4Q6P4E1 433 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 ANKMY2Q8IV38 441 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 PORCNQ9H237 461 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 CISHQ9NSE2 258 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 STXBP5LQ9Y2K9 1186 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 SLX4Q8IY92 1834 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 GRAP2O75791 330 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 ALDH3A1P30838 453 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 IL9RQ01113 521 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 PDIA2Q13087 525 aaKnown RBP11.84□□□□□ -0.51
SSU72-202ENST00000359060 VGLL4Q14135 290 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 Q3C1V9 767 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 ATP13A4Q4VNC1 1196 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 PPP6R3Q5H9R7 873 aaPredicted RBP11.84□□□□□ -0.51
SSU72-202ENST00000359060 ARHGEF18Q6ZSZ5 1173 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 CENPUQ71F23 418 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 TRMT10CQ7L0Y3 403 aaKnown RBP11.84□□□□□ -0.51
SSU72-202ENST00000359060 ADGRA3Q8IWK6 1321 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 GPATCH11Q8N954 259 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 MFSD14AQ96MC6 490 aa11.84□□□□□ -0.51
SSU72-202ENST00000359060 NOCTQ9UK39 431 aaKnown RBP11.84□□□□□ -0.51
SSU72-202ENST00000359060 ZNF214Q9UL59 606 aaPredicted RBP11.84□□□□□ -0.51
SSU72-202ENST00000359060 ADM5C9JUS6 153 aa11.83□□□□□ -0.52
SSU72-202ENST00000359060 CYP1A2P05177 515 aa11.83□□□□□ -0.52
SSU72-202ENST00000359060 PHBP35232 272 aa11.83□□□□□ -0.52
SSU72-202ENST00000359060 TNFSF9P41273 254 aa11.83□□□□□ -0.52
SSU72-202ENST00000359060 ATP11AP98196 1134 aa11.83□□□□□ -0.52
SSU72-202ENST00000359060 CAV1Q03135 178 aa11.83□□□□□ -0.52
SSU72-202ENST00000359060 GRM1Q13255 1194 aa11.83□□□□□ -0.52
SSU72-202ENST00000359060 ABHD15Q6UXT9 468 aa11.83□□□□□ -0.52
SSU72-202ENST00000359060 ZC3H18Q86VM9 953 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms