RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 SAMD3Q8N6K7 520 aa21.71■■□□□ 1.07
COL13A1-202ENST00000357811 SPIRE2Q8WWL2 714 aa21.71■■□□□ 1.07
COL13A1-202ENST00000357811 MSTO1Q9BUK6 570 aa21.71■■□□□ 1.07
COL13A1-202ENST00000357811 TRAIPQ9BWF2 469 aa21.71■■□□□ 1.07
COL13A1-202ENST00000357811 EXTL3O43909 919 aa21.7■■□□□ 1.06
COL13A1-202ENST00000357811 SNRPFP62306 86 aaKnown RBP21.7■■□□□ 1.06
COL13A1-202ENST00000357811 DYNLT1P63172 113 aa21.7■■□□□ 1.06
COL13A1-202ENST00000357811 CUL2Q13617 745 aa21.7■■□□□ 1.06
COL13A1-202ENST00000357811 LACTB2Q53H82 288 aaPredicted RBP21.7■■□□□ 1.06
COL13A1-202ENST00000357811 EEPD1Q7L9B9 569 aa21.7■■□□□ 1.06
COL13A1-202ENST00000357811 SPOCK2Q92563 424 aa21.7■■□□□ 1.06
COL13A1-202ENST00000357811 RBM15Q96T37 977 aaKnown RBP eCLIP21.7■■□□□ 1.06
COL13A1-202ENST00000357811 TCHPQ9BT92 498 aa21.7■■□□□ 1.06
COL13A1-202ENST00000357811 GJA3Q9Y6H8 435 aa21.7■■□□□ 1.06
COL13A1-202ENST00000357811 F8VP50 259 aa21.7■■□□□ 1.06
COL13A1-202ENST00000357811 K7ERI5 159 aa21.7■■□□□ 1.06
COL13A1-202ENST00000357811 C4BPAP04003 597 aaKnown RBP21.7■■□□□ 1.06
COL13A1-202ENST00000357811 TNFAIP8L3Q5GJ75 292 aa21.7■■□□□ 1.06
COL13A1-202ENST00000357811 CRELD2Q6UXH1 353 aaPredicted RBP21.7■■□□□ 1.06
COL13A1-202ENST00000357811 TGS1Q96RS0 853 aaKnown RBP21.7■■□□□ 1.06
COL13A1-202ENST00000357811 SAYSD1Q9NPB0 183 aa21.7■■□□□ 1.06
COL13A1-202ENST00000357811 STK38LQ9Y2H1 464 aa21.7■■□□□ 1.06
COL13A1-202ENST00000357811 NOMO3P69849 1222 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 ELF3P78545 371 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-202ENST00000357811 MFSD5Q6N075 450 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 CDR2LQ86X02 465 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-202ENST00000357811 DEPTORQ8TB45 409 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 TMEM174Q8WUU8 243 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 TMEM109Q9BVC6 243 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 NSRP1Q9H0G5 558 aaKnown RBP21.69■■□□□ 1.06
COL13A1-202ENST00000357811 ARHGAP28Q9P2N2 729 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 CST3P01034 146 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-202ENST00000357811 ACO1P21399 889 aaKnown RBP21.69■■□□□ 1.06
COL13A1-202ENST00000357811 TNFSF9P41273 254 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 NOP14P78316 857 aaKnown RBP21.69■■□□□ 1.06
COL13A1-202ENST00000357811 CENPCQ03188 943 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 SWT1Q5T5J6 900 aaKnown RBP21.69■■□□□ 1.06
COL13A1-202ENST00000357811 LIN9Q5TKA1 542 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 FKBP1CQ5VVH2 108 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 RHOT1Q8IXI2 618 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 MCPH1Q8NEM0 835 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-202ENST00000357811 SERPINB12Q96P63 405 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 RASA4BC9J798 803 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 RASA4O43374 803 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 OSTNP61366 133 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 ZNF568Q3ZCX4 644 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 CYP4A22Q5TCH4 519 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 MIS18BP1Q6P0N0 1132 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 MFSD7Q6UXD7 560 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 SLC17A8Q8NDX2 589 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 NSUN6Q8TEA1 469 aaKnown RBP21.69■■□□□ 1.06
COL13A1-202ENST00000357811 MCEEQ96PE7 176 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 ROPN1BQ9BZX4 212 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-202ENST00000357811 ROPN1Q9HAT0 212 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-202ENST00000357811 IVNS1ABPQ9Y6Y0 642 aa21.69■■□□□ 1.06
COL13A1-202ENST00000357811 ATP4AP20648 1035 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 GARTP22102 1010 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 BRD2P25440 801 aaKnown RBP21.68■■□□□ 1.06
COL13A1-202ENST00000357811 KLF1Q13351 362 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-202ENST00000357811 XRCC4Q13426 336 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 CIAPIN1Q6FI81 312 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 C15orf39Q6ZRI6 1047 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 GRK7Q8WTQ7 553 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 USP15Q9Y4E8 981 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-202ENST00000357811 CYP1A1P04798 512 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-202ENST00000357811 RPSAP08865 295 aaKnown RBP21.68■■□□□ 1.06
COL13A1-202ENST00000357811 CNTN2Q02246 1040 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 TMEM132BQ14DG7 1078 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 SMTNL2Q2TAL5 461 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 ABRAQ8N0Z2 381 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 C4orf33Q8N1A6 199 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 PRCCQ92733 491 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-202ENST00000357811 RMDN2Q96LZ7 410 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 WRNIP1Q96S55 665 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 A1CFQ9NQ94 594 aaKnown RBP21.68■■□□□ 1.06
COL13A1-202ENST00000357811 L3MBTL1Q9Y468 752 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 CEP83Q9Y592 693 aa21.68■■□□□ 1.06
COL13A1-202ENST00000357811 A8MUI8 341 aa21.67■■□□□ 1.06
COL13A1-202ENST00000357811 KRT1P04264 644 aa21.67■■□□□ 1.06
COL13A1-202ENST00000357811 WEE2P0C1S8 567 aa21.67■■□□□ 1.06
COL13A1-202ENST00000357811 GLRA2P23416 452 aa21.67■■□□□ 1.06
COL13A1-202ENST00000357811 GTF2H1P32780 548 aa21.67■■□□□ 1.06
COL13A1-202ENST00000357811 ORC1Q13415 861 aa21.67■■□□□ 1.06
COL13A1-202ENST00000357811 SYCP2LQ5T4T6 812 aa21.67■■□□□ 1.06
COL13A1-202ENST00000357811 AGBL3Q8NEM8 1001 aa21.67■■□□□ 1.06
COL13A1-202ENST00000357811 KCNA3P22001 575 aa21.67■■□□□ 1.06
COL13A1-202ENST00000357811 GPS1Q13098 491 aa21.67■■□□□ 1.06
COL13A1-202ENST00000357811 AVENQ9NQS1 362 aaPredicted RBP21.67■■□□□ 1.06
COL13A1-202ENST00000357811 SLC1A1P43005 524 aa21.66■■□□□ 1.06
COL13A1-202ENST00000357811 MAGEA4P43358 317 aa21.66■■□□□ 1.06
COL13A1-202ENST00000357811 GAD2Q05329 585 aa21.66■■□□□ 1.06
COL13A1-202ENST00000357811 NFX1Q12986 1120 aaKnown RBP21.66■■□□□ 1.06
COL13A1-202ENST00000357811 PSMD6Q15008 389 aa21.66■■□□□ 1.06
COL13A1-202ENST00000357811 ANKMY2Q8IV38 441 aa21.66■■□□□ 1.06
COL13A1-202ENST00000357811 TMEM121Q9BTD3 319 aa21.66■■□□□ 1.06
COL13A1-202ENST00000357811 ECT2Q9H8V3 914 aa21.66■■□□□ 1.06
COL13A1-202ENST00000357811 MARK3P27448 753 aa21.66■■□□□ 1.06
COL13A1-202ENST00000357811 ARSEP51690 589 aa21.66■■□□□ 1.06
COL13A1-202ENST00000357811 NCOA4Q13772 614 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms