RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 OR52Z1P0C646 297 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 MCF2P10911 925 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 GDI1P31150 447 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 CXCL12P48061 93 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 CCR3P51677 355 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 YARSP54577 528 aaKnown RBP9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 TRIM29Q14134 588 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 GAS6Q14393 721 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 GRM2Q14416 872 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 PPP2R5DQ14738 602 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 ZNF174Q15697 407 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 HAUS3Q68CZ6 603 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 LAIR1Q6GTX8 287 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 IQCEQ6IPM2 695 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 PDZD4Q76G19 769 aaPredicted RBP9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 DAW1Q8N136 415 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 APPL2Q8NEU8 664 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 BEST2Q8NFU1 509 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 DEPDC1BQ8WUY9 529 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 FAM3CQ92520 227 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 E2F7Q96AV8 911 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 ZNF512Q96ME7 567 aaPredicted RBP9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 ACAP3Q96P50 834 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 LRRC3Q9BY71 257 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 MRPL4Q9BYD3 311 aaKnown RBP9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 FOXP1Q9H334 677 aaPredicted RBP9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 C17orf75Q9HAS0 396 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 ARHGAP28Q9P2N2 729 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 USP18Q9UMW8 372 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 NDRG2Q9UN36 371 aaKnown RBP9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 KIAA1024Q9UPX6 916 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 RBM19Q9Y4C8 960 aaKnown RBP9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 ATG2BQ96BY7 2078 aa9.39□□□□□ -0.91
COL4A3BP-202ENST00000357457 NCANO14594 1321 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 M0QZQ0 153 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 SLC30A4O14863 429 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 ZNF263O14978 683 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 HRO43593 1189 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 OAZ2O95190 189 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 CNR2P34972 360 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 CCT6AP40227 531 aaKnown RBP9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 VIPR2P41587 438 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 ARPP19P56211 112 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 PEX3P56589 373 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 OSTNP61366 133 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 FCHO2Q0JRZ9 810 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 SPEM2Q0P670 501 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 ST3GAL1Q11201 340 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 TWF1Q12792 350 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 PTGDRQ13258 359 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 SAFBQ15424 915 aaKnown RBP eCLIP9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 SLC10A6Q3KNW5 377 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 ZNF568Q3ZCX4 644 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 CTXN3Q4LDR2 81 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 C1orf228Q6PIY5 440 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 ELMOD1Q8N336 334 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 SPEM1Q8N4L4 309 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 IGSF22Q8N9C0 903 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 ZSCAN18Q8TBC5 510 aaPredicted RBP9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 NETO1Q8TDF5 533 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 DDX12PQ92771 950 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 C18orf25Q96B23 403 aaPredicted RBP9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 MSANTD3Q96H12 275 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 TBC1D32Q96NH3 1257 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 TARS2Q9BW92 718 aaKnown RBP9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 OXCT2Q9BYC2 517 aaPredicted RBP9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 RAB23Q9ULC3 237 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 NUB1Q9Y5A7 615 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 PIAS3Q9Y6X2 628 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 GREB1Q4ZG55 1949 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 CHD6Q8TD26 2715 aa9.38□□□□□ -0.91
COL4A3BP-202ENST00000357457 ASPMQ8IZT6 3477 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 USP24Q9UPU5 2620 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 CCDC169A6NNP5 214 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 HEPACAM2A8MVW5 462 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 K7ESF4 209 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 CHADO15335 359 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 VNN2O95498 520 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 CCNE1P24864 410 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 HOXA6P31267 233 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 TRAPPC10P48553 1259 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 SATB1Q01826 763 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 MAPK7Q13164 816 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 DMP1Q13316 513 aaPredicted RBP9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 TEAD2Q15562 447 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 ZBTB6Q15916 424 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 CSRP2Q16527 193 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 WDR44Q5JSH3 913 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 ZNF280DQ6N043 979 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 MPZL3Q6UWV2 235 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 RNF19BQ6ZMZ0 732 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 C1orf186Q6ZWK4 172 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 TMC8Q8IU68 726 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 SHKBP1Q8TBC3 707 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 RSPRY1Q96DX4 576 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 ZBTB45Q96K62 511 aaPredicted RBP9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 C8orf33Q9H7E9 229 aaPredicted RBP9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 ASAH2Q9NR71 780 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 SEMA4GQ9NTN9 838 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 DDX19AQ9NUU7 478 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms