RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 STYK1Q6J9G0 422 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 SCFD2Q8WU76 684 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 THOC1Q96FV9 657 aaKnown RBP12.33□□□□□ -0.44
COL9A1-202ENST00000357250 RBM12Q9NTZ6 932 aaKnown RBP12.33□□□□□ -0.44
COL9A1-202ENST00000357250 SYCE1LA8MT33 242 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 SLURP2P0DP57 97 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 CYP11B2P19099 503 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 SPRP35270 261 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-202ENST00000357250 STX3Q13277 289 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 LRRC14Q15048 493 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 LCA5Q86VQ0 697 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 PBXIP1Q96AQ6 731 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 NT5C1AQ9BXI3 368 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 EPC1Q9H2F5 836 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 ANLNQ9NQW6 1124 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 MYCP01106 439 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-202ENST00000357250 HLA-DRAP01903 254 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 SNRPAP09012 282 aaKnown RBP12.33□□□□□ -0.44
COL9A1-202ENST00000357250 CHN1P15882 459 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 RAD23BP54727 409 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 NME3Q13232 169 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 INPP5AQ14642 412 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 SAMD7Q7Z3H4 446 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 ASIC4Q96FT7 647 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 MLXIPLQ9NP71 852 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 ZNF70Q9UC06 446 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-202ENST00000357250 RGL2O15211 777 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 HBP1O60381 514 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 MYBP10242 640 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 MTMR2Q13614 643 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 BOLA3Q53S33 107 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 OTUD5Q96G74 571 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 SERPINB12Q96P63 405 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 MMTAG2Q9BU76 263 aaKnown RBP12.33□□□□□ -0.44
COL9A1-202ENST00000357250 KDM4CQ9H3R0 1056 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 SHPRHQ149N8 1683 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 ZNF185O15231 689 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 DPEP1P16444 411 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 SLC9A1P19634 815 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 STIP1P31948 543 aaKnown RBP12.32□□□□□ -0.44
COL9A1-202ENST00000357250 PNPLA4P41247 253 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 EVX2Q03828 476 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 EFHC1Q5JVL4 640 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 EFL1Q7Z2Z2 1120 aaKnown RBP12.32□□□□□ -0.44
COL9A1-202ENST00000357250 RAB6BQ9NRW1 208 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 OLA1Q9NTK5 396 aaKnown RBP12.32□□□□□ -0.44
COL9A1-202ENST00000357250 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.32□□□□□ -0.44
COL9A1-202ENST00000357250 TJP2Q9UDY2 1190 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 KIAA1257Q9ULG3 409 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 LRRIQ3A6PVS8 624 aaPredicted RBP12.32□□□□□ -0.44
COL9A1-202ENST00000357250 KITP10721 976 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 TAL1P17542 331 aaPredicted RBP12.32□□□□□ -0.44
COL9A1-202ENST00000357250 COMTP21964 271 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 PCSK1P29120 753 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 CCNJLQ8IV13 435 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 AFG1LQ8WV93 481 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 EGFL8Q99944 293 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
COL9A1-202ENST00000357250 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 RAD51CO43502 376 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 PSTPIP1O43586 416 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 FAM107AO95990 144 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 MAP3K10Q02779 954 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 FEZF2Q8TBJ5 459 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 KCNQ5Q9NR82 932 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 FBXO28Q9NVF7 368 aa12.32□□□□□ -0.44
COL9A1-202ENST00000357250 CHCHD3Q9NX63 227 aaKnown RBP12.32□□□□□ -0.44
COL9A1-202ENST00000357250 WARS2Q9UGM6 360 aaKnown RBP12.32□□□□□ -0.44
COL9A1-202ENST00000357250 LSP1P33241 339 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 MAGEA4P43358 317 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 SULT1E1P49888 294 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 PRKCEQ02156 737 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 CAPRIN1Q14444 709 aaKnown RBP12.31□□□□□ -0.44
COL9A1-202ENST00000357250 GRIK5Q16478 980 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 CD302Q8IX05 232 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 MICALL2Q8IY33 904 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 PRMT6Q96LA8 375 aaPredicted RBP12.31□□□□□ -0.44
COL9A1-202ENST00000357250 TRIM51Q9BSJ1 452 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 TMEM117Q9H0C3 514 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 GRID1Q9ULK0 1009 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 PCDHGB4Q9UN71 923 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 RRN3P2A6NIE6 340 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 RASSF10A6NK89 507 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 APRTP07741 180 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 SV2CQ496J9 727 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 RNF181Q9P0P0 153 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 TEKT2Q9UIF3 430 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 CAMTA1Q9Y6Y1 1673 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 CCDC195A0A1B0GUA6 201 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 TCRBV5S4A2TA0A5A2 114 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 GZMAP12544 262 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 KRT4P19013 534 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 KLRC1P26715 233 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 RABGAP1LQ5R372 815 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 C16orf89Q6UX73 402 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 ANGPTL8Q6UXH0 198 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 PPIL6Q8IXY8 311 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 OR6J1Q8NGC5 347 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 SLC26A7Q8TE54 656 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 MS4A14Q96JA4 679 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms