RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 LAMB2P55268 1798 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 PI4K2BG5E9Z4 385 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 GOLGA8SH3BPF8 625 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 GOLGA8MH3BSY2 632 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 SMAPO00193 183 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 PSMD10O75832 226 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 CBX6O95503 412 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 CYP3A4P08684 503 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 ATF7P17544 494 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 ITIH2P19823 946 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 FOXN2P32314 431 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 STAT2P52630 851 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 MFAP3P55082 362 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 PLCB3Q01970 1234 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 MCL1Q07820 350 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 CBX3Q13185 183 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 SIX1Q15475 284 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 FAM102BQ5T8I3 360 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 IZUMO3Q5VZ72 239 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 C15orf52Q6ZUT6 534 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 MIER3Q7Z3K6 550 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 DAW1Q8N136 415 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 SMC1BQ8NDV3 1235 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 PLEKHO2Q8TD55 490 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 STK32AQ8WU08 396 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 RBM15Q96T37 977 aaKnown RBP eCLIP8.72□□□□□ -1.015e-10■■■□□ 14.7
CDC42SE1-201ENST00000357235 SAYSD1Q9NPB0 183 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 HOMER2Q9NSB8 354 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 NYAP2Q9P242 653 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 MAST2Q6P0Q8 1798 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 CDH16O75309 829 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 CCDC166P0CW27 439 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 CA4P22748 312 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 JAG1P78504 1218 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 SEPT7Q16181 437 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 GALNTL6Q49A17 601 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 CCDC92Q53HC0 331 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 TMEM179Q6ZVK1 233 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 CCDC80Q76M96 950 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 HAUS6Q7Z4H7 955 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 TAS1R2Q8TE23 839 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 UCMAQ8WVF2 138 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 SPIRE2Q8WWL2 714 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 PTPRN2Q92932 1015 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 HIC2Q96JB3 615 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 TEKT3Q9BXF9 490 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 LRRC19Q9H756 370 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 TDRD3Q9H7E2 651 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 DCTN4Q9UJW0 460 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 hCG_2014768A0A024R1R8 64 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 SLC26A4O43511 780 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 ONECUT3O60422 494 aaPredicted RBP8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 GJB6O95452 261 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 ADRB2P07550 413 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 ZSCAN5DPP0CG00 497 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 TPBGLP0DKB5 382 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 KCNA3P22001 575 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 CIITAP33076 1130 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 CACNA2D1P54289 1103 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 SP4Q02446 784 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 CCDC15Q0P6D6 951 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 P3H1Q32P28 736 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 KBTBD12Q3ZCT8 623 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 CGB2Q6NT52 195 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 CD101Q93033 1021 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 ACCSQ96QU6 501 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 NUDCD1Q96RS6 583 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 TMEM109Q9BVC6 243 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 TRAIPQ9BWF2 469 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 ALG13Q9NP73 1137 aaKnown RBP8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 LRRC4BQ9NT99 713 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 WHRNQ9P202 907 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 NOCTQ9UK39 431 aaKnown RBP8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 GTF3C4Q9UKN8 822 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 PHTF1Q9UMS5 762 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 LRCH1Q9Y2L9 728 aa8.71□□□□□ -1.01
CDC42SE1-201ENST00000357235 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 TMEM221A6NGB7 291 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 FAM47DPA6NHR8 397 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 TP73O15350 636 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 UNC5CO95185 931 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 OAS1P00973 400 aaKnown RBP8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 ALAS1P13196 640 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 KRT10P13645 584 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 TAC1P20366 129 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 RFX1P22670 979 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 EPHB2P29323 1055 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 PTDSS1P48651 473 aaKnown RBP8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 SOX10P56693 466 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 TMED1Q13445 227 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 RCN2Q14257 317 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 SNRNP35Q16560 246 aaKnown RBP8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 CCNJLQ8IV13 435 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 ANKRD35Q8N283 1001 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZBTB8BQ8NAP8 495 aaPredicted RBP8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 RBBP8NLQ8NC74 664 aaPredicted RBP8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 ACER1Q8TDN7 264 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 ACSF2Q96CM8 615 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms