RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 TPRG1Q6ZUI0 275 aa15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 MYCT1Q8N699 235 aa15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 BEST2Q8NFU1 509 aa15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 ZNF512Q96ME7 567 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 TIMM13Q9Y5L4 95 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 OGTO15294 1046 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 FAM13AO94988 1023 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 VNN2O95498 520 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 ADRB2P07550 413 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 PLCG1P19174 1290 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 TARSP26639 723 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 MCM2P49736 904 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 GRIN1Q05586 938 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 IQCEQ6IPM2 695 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 ZSWIM3Q96MP5 696 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 ASB16Q96NS5 453 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 RPF1Q9H9Y2 349 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 PARVGQ9HBI0 331 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 ZFP14Q9HCL3 533 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 HEBP1Q9NRV9 189 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 SPATA6Q9NWH7 488 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 DENND4CQ5VZ89 1909 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 NUP210Q8TEM1 1887 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 SHISA7A6NL88 538 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 PPEF2O14830 753 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 XPOTO43592 962 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 TRAK2O60296 914 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 BMP15O95972 392 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 OR4Q2P0C623 313 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 MYL4P12829 197 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 SCP2P22307 547 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 LONP1P36776 959 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 MAGEA9P43362 315 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 EPHA5P54756 1037 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 GRM2Q14416 872 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 KARSQ15046 597 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 SLC39A4Q6P5W5 647 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 DSTYKQ6XUX3 929 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 RAD54LQ92698 747 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 DNASE1L2Q92874 299 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 CLDN23Q96B33 292 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 TSPAN18Q96SJ8 248 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 FIZ1Q96SL8 496 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 OXCT2Q9BYC2 517 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 ASAH2Q9NR71 780 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 YIPF1Q9Y548 306 aa15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-201ENST00000354363 ZNF292O60281 2723 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 A0A0B4J269 797 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 LAMTOR5O43504 91 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 CENPBP07199 599 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 GJA1P17302 382 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 ZNF528Q3MIS6 628 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 SPATA1Q5VX52 437 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 BRAPQ7Z569 592 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 USP37Q86T82 979 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 LEMD2Q8NC56 503 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 SMARCD2Q92925 531 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 PGLYRP2Q96PD5 576 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 NELL2Q99435 816 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 MSTO1Q9BUK6 570 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 BRD9Q9H8M2 597 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 FBXO4Q9UKT5 387 aa15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 ZNF638Q14966 1978 aaKnown RBP15.71■□□□□ 0.11
PRPF40A-201ENST00000354363 WDR87Q6ZQQ6 2873 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 KIF26AQ9ULI4 1882 aaPredicted RBP15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 OR6C75A6NL08 312 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 KRT18P05783 430 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 TYMPP19971 482 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 NMT1P30419 496 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 GTF2BQ00403 316 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 FZD5Q13467 585 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 SF3A1Q15459 793 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 JADE1Q6IE81 842 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 VITQ6UXI7 678 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 ZNF852Q6ZMS4 543 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 RASSF8Q8NHQ8 419 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 LARP4BQ92615 738 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 FAM212AQ96EL1 285 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 TRMT61BQ9BVS5 477 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 LRRC3Q9BY71 257 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 CRISPLD1Q9H336 500 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 ZHX3Q9H4I2 956 aa15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 UPF2Q9HAU5 1272 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 CPSF3Q9UKF6 684 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-201ENST00000354363 NCAM2O15394 837 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 RPS9P46781 194 aaKnown RBP15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 ID4P47928 161 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 LILRA4P59901 499 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 GPR17Q13304 367 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 TEAD2Q15562 447 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 OVOS1Q6IE37 1185 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 MAP4K3Q8IVH8 894 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 CD302Q8IX05 232 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 SHKBP1Q8TBC3 707 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 SENP8Q96LD8 212 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 DNAJC25Q9H1X3 360 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 TRPV4Q9HBA0 871 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 MRPS17Q9Y2R5 130 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms