RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SCNM1Q9BWG6 230 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 STRA6Q9BX79 667 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 BCO2Q9BYV7 579 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 NUCKS1Q9H1E3 243 aaKnown RBP8.92□□□□□ -0.98
CD44-205ENST00000352818 MRPL44Q9H9J2 332 aaKnown RBP8.92□□□□□ -0.98
CD44-205ENST00000352818 METTL14Q9HCE5 456 aaKnown RBP8.92□□□□□ -0.98
CD44-205ENST00000352818 DZANK1Q9NVP4 752 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 ZNHIT6Q9NWK9 470 aaKnown RBP8.92□□□□□ -0.98
CD44-205ENST00000352818 TBC1D7Q9P0N9 293 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 WRAP73Q9P2S5 460 aaPredicted RBP8.92□□□□□ -0.98
CD44-205ENST00000352818 DAAM1Q9Y4D1 1078 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 CDY2AQ9Y6F7 541 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 TEX15Q9BXT5 2789 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 PIEZO2Q9H5I5 2752 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 NRCAMQ92823 1304 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 WDR64B1ANS9 1081 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 EIF3CLB5ME19 914 aaKnown RBP8.91□□□□□ -0.98
CD44-205ENST00000352818 ANHXE9PGG2 379 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 PPP1R37O75864 691 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 PRB1P04280 392 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 STAG3L1P0CL83 205 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 EIF2AK2P19525 551 aaKnown RBP8.91□□□□□ -0.98
CD44-205ENST00000352818 CD72P21854 359 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 NR2F2P24468 414 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 CASQ1P31415 396 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 HOXD13P35453 343 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 QARSP47897 775 aaKnown RBP8.91□□□□□ -0.98
CD44-205ENST00000352818 CACNB1Q02641 598 aaPredicted RBP8.91□□□□□ -0.98
CD44-205ENST00000352818 SRSF5Q13243 272 aaKnown RBP8.91□□□□□ -0.98
CD44-205ENST00000352818 SMC1AQ14683 1233 aaKnown RBP8.91□□□□□ -0.98
CD44-205ENST00000352818 COL28A1Q2UY09 1125 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 SPOUT1Q5T280 376 aaKnown RBP8.91□□□□□ -0.98
CD44-205ENST00000352818 STPG1Q5TH74 334 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 ARHGEF16Q5VV41 709 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 NLRX1Q86UT6 975 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 SLC9A9Q8IVB4 645 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 CELF5Q8N6W0 485 aaKnown RBP8.91□□□□□ -0.98
CD44-205ENST00000352818 GOLGA5Q8TBA6 731 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 NSUN6Q8TEA1 469 aaKnown RBP8.91□□□□□ -0.98
CD44-205ENST00000352818 PIGOQ8TEQ8 1089 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 AUTS2Q8WXX7 1259 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 ZBTB10Q96DT7 871 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 CDHR1Q96JP9 859 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 EIF3CQ99613 913 aaKnown RBP8.91□□□□□ -0.98
CD44-205ENST00000352818 ST6GALNAC4Q9H4F1 302 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 ANKEF1Q9NU02 776 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 AGPAT5Q9NUQ2 364 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 RNF19AQ9NV58 838 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 CEP72Q9P209 647 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 CGNQ9P2M7 1197 aaKnown RBP8.91□□□□□ -0.98
CD44-205ENST00000352818 TCEAL9Q9UHQ7 104 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 PADI3Q9ULW8 664 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.91□□□□□ -0.98
CD44-205ENST00000352818 EPN1Q9Y6I3 576 aaPredicted RBP8.91□□□□□ -0.98
CD44-205ENST00000352818 KIAA1217Q5T5P2 1943 aa8.91□□□□□ -0.98
CD44-205ENST00000352818 ATP8B3O60423 1300 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 SSU72P8A0A1W2PR75 194 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 GTPBP10A4D1E9 387 aaKnown RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 FAM170BA6NMN3 283 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 FANCGO15287 622 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 TGFB1I1O43294 461 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 HRO43593 1189 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 KIF5CO60282 957 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 DKC1O60832 514 aaKnown RBP eCLIP8.9□□□□□ -0.98
CD44-205ENST00000352818 HIP1RO75146 1068 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 PRPF6O94906 941 aaKnown RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 GCNT3O95395 438 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 LCA5LO95447 670 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 GGPS1O95749 300 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 NR3C1P04150 777 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 NR3C2P08235 984 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 EPB41P11171 864 aaKnown RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 FGFR1P11362 822 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 PLA2G2AP14555 144 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 IBSPP21815 317 aaPredicted RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 UBA1P22314 1058 aaKnown RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 ARHGAP25P42331 645 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 RARRES1P49788 294 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 KLK7P49862 253 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 GNG11P61952 73 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 PSMC5P62195 406 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 NCBP1Q09161 790 aaKnown RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 RAD51AP2Q09MP3 1159 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 KCNMA1Q12791 1236 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 MTAPQ13126 283 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 HTR4Q13639 388 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 STXBP2Q15833 593 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 ARHGAP29Q52LW3 1261 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 PDXDC1Q6P996 788 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 KCNT2Q6UVM3 1135 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 ZNF720Q7Z2F6 126 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 C12orf56Q8IXR9 622 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 SMAP1Q8IYB5 467 aaPredicted RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 MYCT1Q8N699 235 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 EHBP1Q8NDI1 1231 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 ACRBPQ8NEB7 543 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 NEK11Q8NG66 645 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 BBXQ8WY36 941 aaPredicted RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 BAP1Q92560 729 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 HVCN1Q96D96 273 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms