RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 KCNA2P16389 499 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 WDR4P57081 412 aaKnown RBP19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 CCNG2Q16589 344 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 GALNTL6Q49A17 601 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 RHOT1Q8IXI2 618 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 ANKLE1Q8NAG6 615 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 GRK7Q8WTQ7 553 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 FAM212AQ96EL1 285 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 STAMBPL1Q96FJ0 436 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 VWA5AO00534 786 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 SUN1O94901 812 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 GARTP22102 1010 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 KLRC2P26717 231 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 GNA15P30679 374 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 MAGEA4P43358 317 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 ALDH5A1P51649 535 aaPredicted RBP19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 MAP3K10Q02779 954 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 MTM1Q13496 603 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 ZNF394Q53GI3 561 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 ABRAQ8N0Z2 381 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 SLC17A8Q8NDX2 589 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 KIAA1683Q9H0B3 1180 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 SAYSD1Q9NPB0 183 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 ARHGAP28Q9P2N2 729 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 ANKFY1Q9P2R3 1169 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 AGO2Q9UKV8 859 aaKnown RBP19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 STK38LQ9Y2H1 464 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 RASA4BC9J798 803 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 RASA4O43374 803 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 EXTL3O43909 919 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 BANF1O75531 89 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 ATF7P17544 494 aaPredicted RBP19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 CXCL9Q07325 125 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 ENOSF1Q7L5Y1 443 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 USP37Q86T82 979 aa19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 TARS2Q9BW92 718 aaKnown RBP19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 GEMIN8Q9NWZ8 242 aaKnown RBP19.19■□□□□ 0.66
PTP4A3-202ENST00000349124 TTLL13PA6NNM8 815 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 F8VP50 259 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 POC1B-GALNT4F8VUJ3 575 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 KRT16P08779 473 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 NQO1P15559 274 aaKnown RBP19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 TAC1P20366 129 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 GCAP28676 217 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 PTP4A2Q12974 167 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 CUL2Q13617 745 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 MFSD7Q6UXD7 560 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 TAB3Q8N5C8 712 aaPredicted RBP19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 IVNS1ABPQ9Y6Y0 642 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 ZBED4O75132 1171 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 ACTR2P61160 394 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 SP2Q02086 613 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 BNIP1Q12981 228 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 NFX1Q12986 1120 aaKnown RBP19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 PRAMEF18Q5VWM3 479 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 SYDE1Q6ZW31 735 aaPredicted RBP19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 CCDC89Q8N998 374 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 ASAP3Q8TDY4 903 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 MAML1Q92585 1016 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 LPAR1Q92633 364 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 IFT74Q96LB3 600 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 FAM81BQ96LP2 452 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 TEPSINQ96N21 525 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 SAE1Q9UBE0 346 aaPredicted RBP19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 PRKAG3Q9UGI9 489 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 ZNF148Q9UQR1 794 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 BRWD3Q6RI45 1802 aa19.18■□□□□ 0.66
PTP4A3-202ENST00000349124 DGAT1O75907 488 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 CST3P01034 146 aaPredicted RBP19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 ATP4AP20648 1035 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 FSTL1Q12841 308 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 PSMD6Q15008 389 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 FKBP1CQ5VVH2 108 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 RBBP8NLQ8NC74 664 aaPredicted RBP19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 AGAP11Q8TF27 550 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 MAIP1Q8WWC4 291 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 KLHL29Q96CT2 875 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 SLCO1B3Q9NPD5 702 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 ARL2BPQ9Y2Y0 163 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 GOLGA8SH3BPF8 625 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 GOLGA8MH3BSY2 632 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 CDH16O75309 829 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 MYBL1P10243 752 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 COPS2P61201 443 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 NEDD9Q14511 834 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 LIN9Q5TKA1 542 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 ECHDC2Q86YB7 292 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 ATP6V0A1Q93050 837 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 RBAKQ9NYW8 714 aaPredicted RBP19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 FBXO40Q9UH90 709 aa19.17■□□□□ 0.66
PTP4A3-202ENST00000349124 LRRIQ4A6NIV6 560 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 PEX10O60683 326 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 ECM2O94769 699 aaPredicted RBP19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 ATP5DP30049 168 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 OGDHQ02218 1023 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 GAD2Q05329 585 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 ZNF252P-AS1Q0IIN9 211 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 DNAJC3Q13217 504 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 PLEKHA7Q6IQ23 1121 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms