RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 AADACL2Q6P093 401 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 MAMDC4Q6UXC1 1216 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 CDR2LQ86X02 465 aaPredicted RBP22.69■■□□□ 1.22
PTPN18-202ENST00000347849 RHPN2Q8IUC4 686 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 FMNL3Q8IVF7 1028 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 UHMK1Q8TAS1 419 aaKnown RBP22.69■■□□□ 1.22
PTPN18-202ENST00000347849 FBXO25Q8TCJ0 367 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 DDX1Q92499 740 aaKnown RBP22.69■■□□□ 1.22
PTPN18-202ENST00000347849 P3H4Q92791 437 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 FAM167AQ96KS9 214 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 KCNG1Q9UIX4 513 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 GHRP10912 638 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 CLCN3P51790 818 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 ARHGAP1Q07960 439 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 USP37Q86T82 979 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 TACO1Q9BSH4 297 aaKnown RBP22.69■■□□□ 1.22
PTPN18-202ENST00000347849 APOBEC3GQ9HC16 384 aaKnown RBP22.69■■□□□ 1.22
PTPN18-202ENST00000347849 KIAA1586Q9HCI6 787 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 PNMA3Q9UL41 463 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 FAM189A1O60320 539 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 KRT5P13647 590 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 TTLL4Q14679 1199 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 PPP1R7Q15435 360 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 IER5Q5VY09 327 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 ANKS4BQ8N8V4 417 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 N4BP2L2Q92802 583 aaPredicted RBP22.68■■□□□ 1.22
PTPN18-202ENST00000347849 DIS3Q9Y2L1 958 aaKnown RBP22.68■■□□□ 1.22
PTPN18-202ENST00000347849 SCN4AP35499 1836 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 SIP14410 1827 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 GRIN3BO60391 1043 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 DNAJC8O75937 253 aaPredicted RBP22.68■■□□□ 1.22
PTPN18-202ENST00000347849 NUDT17P0C025 328 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 ELF1P32519 619 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 IGBP1P78318 339 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 SPDYCQ5MJ68 293 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 SLFN12LQ6IEE8 588 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 HIBCHQ6NVY1 386 aaPredicted RBP22.68■■□□□ 1.22
PTPN18-202ENST00000347849 JAMLQ86YT9 394 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 ALG3Q92685 438 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 NAP1L3Q99457 506 aaPredicted RBP22.68■■□□□ 1.22
PTPN18-202ENST00000347849 PTPN18Q99952 460 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 CARD9Q9H257 536 aa22.68■■□□□ 1.22
PTPN18-202ENST00000347849 UMODL1Q5DID0 1318 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.67■■□□□ 1.22
PTPN18-202ENST00000347849 RGS16O15492 202 aaPredicted RBP22.67■■□□□ 1.22
PTPN18-202ENST00000347849 B4GALT5O43286 388 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 CSDE1O75534 798 aaKnown RBP22.67■■□□□ 1.22
PTPN18-202ENST00000347849 ABCD1P33897 745 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 MMP13P45452 471 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 CPNE8Q86YQ8 564 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 VTI1AQ96AJ9 217 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 NLRP4Q96MN2 994 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 ADAM7Q9H2U9 754 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 CLDN3O15551 220 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 MGRN1O60291 552 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 CETPP11597 493 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 ADCYAP1R1P41586 468 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 ELF3P78545 371 aaPredicted RBP22.67■■□□□ 1.22
PTPN18-202ENST00000347849 UBAP2Q5T6F2 1119 aaKnown RBP22.67■■□□□ 1.22
PTPN18-202ENST00000347849 LRRC34Q8IZ02 419 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 C18orf8Q96DM3 657 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 PPP1R16BQ96T49 567 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 PRMT1Q99873 361 aaKnown RBP22.67■■□□□ 1.22
PTPN18-202ENST00000347849 TCHPQ9BT92 498 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 SEMA4AQ9H3S1 761 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 MINDY3Q9H8M7 445 aa22.67■■□□□ 1.22
PTPN18-202ENST00000347849 ASB14A6NK59 587 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 KIAA0391O15091 583 aaKnown RBP22.66■■□□□ 1.22
PTPN18-202ENST00000347849 EZRP15311 586 aaKnown RBP22.66■■□□□ 1.22
PTPN18-202ENST00000347849 PIK3CAP42336 1068 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 PPP2R5EQ16537 467 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 CDCA2Q69YH5 1023 aaPredicted RBP22.66■■□□□ 1.22
PTPN18-202ENST00000347849 ZDHHC24Q6UX98 284 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 ATXN2LQ8WWM7 1075 aaKnown RBP22.66■■□□□ 1.22
PTPN18-202ENST00000347849 PGM2Q96G03 612 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 ELAC2Q9BQ52 826 aaKnown RBP22.66■■□□□ 1.22
PTPN18-202ENST00000347849 SMARCAD1Q9H4L7 1026 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 FAM187AA6NFU0 413 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 ABLIM1O14639 778 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 IQCF3P0C7M6 154 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 GCNT1Q02742 428 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 EFCAB12Q6NXP0 572 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 MAGEC3Q8TD91 643 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 ACO2Q99798 780 aaKnown RBP22.66■■□□□ 1.22
PTPN18-202ENST00000347849 C1orf112Q9NSG2 853 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 INTS9Q9NV88 658 aaKnown RBP22.66■■□□□ 1.22
PTPN18-202ENST00000347849 CTTNBP2NLQ9P2B4 639 aa22.66■■□□□ 1.22
PTPN18-202ENST00000347849 RTN2O75298 545 aa22.65■■□□□ 1.22
PTPN18-202ENST00000347849 PRKCBP05771 671 aa22.65■■□□□ 1.22
PTPN18-202ENST00000347849 SLCO1A2P46721 670 aa22.65■■□□□ 1.22
PTPN18-202ENST00000347849 CDR2Q01850 454 aa22.65■■□□□ 1.22
PTPN18-202ENST00000347849 PIGWQ7Z7B1 504 aa22.65■■□□□ 1.22
PTPN18-202ENST00000347849 TAX1BP1Q86VP1 789 aa22.65■■□□□ 1.22
PTPN18-202ENST00000347849 BTBD6Q96KE9 485 aa22.65■■□□□ 1.22
PTPN18-202ENST00000347849 BAIAP2L1Q9UHR4 511 aa22.65■■□□□ 1.22
PTPN18-202ENST00000347849 SUFUQ9UMX1 484 aa22.65■■□□□ 1.22
PTPN18-202ENST00000347849 ASAP2O43150 1006 aa22.65■■□□□ 1.22
PTPN18-202ENST00000347849 CST3P01034 146 aaPredicted RBP22.65■■□□□ 1.22
PTPN18-202ENST00000347849 CFHP08603 1231 aa22.65■■□□□ 1.22
PTPN18-202ENST00000347849 VIMP08670 466 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms