RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 ZSCAN5DPP0CG00 497 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 LMNB2Q03252 620 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 C6orf163Q5TEZ5 329 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 RASSF3Q86WH2 238 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 NCSTNQ92542 709 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 HAPLN3Q96S86 360 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 TSSK1BQ9BXA7 367 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 OSBPL8Q9BZF1 889 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 KIAA1551Q9HCM1 1747 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 ZNF142P52746 1687 aaPredicted RBP16.21■□□□□ 0.19
LMNA-201ENST00000347559 CAMTA2O94983 1202 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 PGM3O95394 542 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 TMEM62Q0P6H9 643 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 BMT2Q1RMZ1 405 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 C1orf146Q5VVC0 180 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 TCP10LQ8TDR4 215 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 MKNK1Q9BUB5 465 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 TUBB6Q9BUF5 446 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 MANSC1Q9H8J5 431 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 PPM1HQ9ULR3 514 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 LAMB1P07942 1786 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 COL22A1Q8NFW1 1626 aaPredicted RBP16.21■□□□□ 0.19
LMNA-201ENST00000347559 KIF13BQ9NQT8 1826 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 FCHO1O14526 889 aa16.21■□□□□ 0.18
LMNA-201ENST00000347559 STK10O94804 968 aaKnown RBP16.21■□□□□ 0.18
LMNA-201ENST00000347559 SMARCA1P28370 1054 aa16.21■□□□□ 0.18
LMNA-201ENST00000347559 MAGEA8P43361 318 aa16.21■□□□□ 0.18
LMNA-201ENST00000347559 NME8Q8N427 588 aa16.21■□□□□ 0.18
LMNA-201ENST00000347559 MIPOL1Q8TD10 442 aa16.21■□□□□ 0.18
LMNA-201ENST00000347559 TTC25Q96NG3 672 aa16.21■□□□□ 0.18
LMNA-201ENST00000347559 ANO3Q9BYT9 981 aa16.21■□□□□ 0.18
LMNA-201ENST00000347559 TYROBPO43914 113 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 PENKP01210 267 aaPredicted RBP16.2■□□□□ 0.18
LMNA-201ENST00000347559 ITGA2BP08514 1039 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 BMP3P12645 472 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 YY1P25490 414 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 RPA1P27694 616 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 MAN1A1P33908 653 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 MAGEA10P43363 369 aaPredicted RBP16.2■□□□□ 0.18
LMNA-201ENST00000347559 KCNQ4P56696 695 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 BFSP1Q12934 665 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 MTMR2Q13614 643 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 EFTUD2Q15029 972 aaKnown RBP eCLIP16.2■□□□□ 0.188e-7■■■■■ 32.8
LMNA-201ENST00000347559 SYDE1Q6ZW31 735 aaPredicted RBP16.2■□□□□ 0.18
LMNA-201ENST00000347559 ALYREFQ86V81 257 aaKnown RBP16.2■□□□□ 0.18
LMNA-201ENST00000347559 TAB3Q8N5C8 712 aaPredicted RBP16.2■□□□□ 0.18
LMNA-201ENST00000347559 GLIS1Q8NBF1 620 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 CCDC110Q8TBZ0 833 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 EPS8L1Q8TE68 723 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 DDX18Q9NVP1 670 aaKnown RBP16.2■□□□□ 0.18
LMNA-201ENST00000347559 DDX43Q9NXZ2 648 aaKnown RBP16.2■□□□□ 0.18
LMNA-201ENST00000347559 CHMP2AO43633 222 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 ASLP04424 464 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 RARBP10826 455 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 MYL2P10916 166 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 CRKLP46109 303 aaKnown RBP16.2■□□□□ 0.18
LMNA-201ENST00000347559 CLK2P49760 499 aaKnown RBP16.2■□□□□ 0.18
LMNA-201ENST00000347559 AP2B1P63010 937 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 CDK16Q00536 496 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 TBC1D9BQ66K14 1250 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 KAZNQ674X7 775 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 LLGL2Q6P1M3 1020 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 C16orf86Q6ZW13 317 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 RAPH1Q70E73 1250 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 PPP2R3CQ969Q6 453 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 NMUR2Q9GZQ4 415 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 MIS12Q9H081 205 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 AGPAT3Q9NRZ7 376 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 BLOC1S6Q9UL45 172 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 ADAMTSL3P82987 1691 aa16.2■□□□□ 0.18
LMNA-201ENST00000347559 SNED1Q8TER0 1413 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 ETS1P14921 441 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 GRIA2P42262 883 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 PDIA2Q13087 525 aaKnown RBP16.19■□□□□ 0.18
LMNA-201ENST00000347559 TMED1Q13445 227 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 EPC2Q52LR7 807 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 ASPRV1Q53RT3 343 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 SPDYAQ5MJ70 313 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 TPH2Q8IWU9 490 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 SCUBE1Q8IWY4 988 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 SLFN12Q8IYM2 578 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 TTC17Q96AE7 1141 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 RBM17Q96I25 401 aaKnown RBP16.19■□□□□ 0.18
LMNA-201ENST00000347559 SPATA31A1Q5TZJ5 1347 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 A8MXQ7 604 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 TISP43B9A030 160 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 ARL4CP56559 192 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 TTLL12Q14166 644 aaPredicted RBP16.19■□□□□ 0.18
LMNA-201ENST00000347559 RASA2Q15283 850 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 RINT1Q6NUQ1 792 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 CCDC174Q6PII3 467 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 FAM178BQ8IXR5 827 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 BBOF1Q8ND07 529 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 LENG1Q96BZ8 264 aaPredicted RBP16.19■□□□□ 0.18
LMNA-201ENST00000347559 AGBL1Q96MI9 1066 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 SENP1Q9P0U3 644 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 GYS1P13807 737 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 BTDP43251 543 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 RPS8P62241 208 aaKnown RBP16.19■□□□□ 0.18
LMNA-201ENST00000347559 CETN1Q12798 172 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms