RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 IL9RQ01113 521 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 SYTL3Q4VX76 610 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 C6orf118Q5T5N4 469 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 ZNF280DQ6N043 979 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 EFCAB12Q6NXP0 572 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 RFFLQ8WZ73 363 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 VTA1Q9NP79 307 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 NCAM2O15394 837 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 ALDH2P05091 517 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 GRIK5Q16478 980 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 MAP3K21Q5TCX8 1036 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 TTC13Q8NBP0 860 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 C11orf70Q9BRQ4 267 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 EPN3Q9H201 632 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 KLHL11Q9NVR0 708 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 DBR1Q9UK59 544 aaKnown RBP11.46□□□□□ -0.57
CLCN6-202ENST00000346436 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.57
CLCN6-202ENST00000346436 AKAP12Q02952 1782 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 E5RI56 91 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 PDXKO00764 312 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 TROVE2P10155 538 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLCN6-202ENST00000346436 SLC8A1P32418 973 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 TBCCQ15814 346 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 CD302Q8IX05 232 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 ZNF668Q96K58 619 aaPredicted RBP11.46□□□□□ -0.57
CLCN6-202ENST00000346436 MED15Q96RN5 788 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 UBQLN1Q9UMX0 589 aaKnown RBP11.46□□□□□ -0.57
CLCN6-202ENST00000346436 SNX2O60749 519 aa11.46□□□□□ -0.58
CLCN6-202ENST00000346436 ADCY2Q08462 1091 aa11.46□□□□□ -0.58
CLCN6-202ENST00000346436 DAGLBQ8NCG7 672 aa11.46□□□□□ -0.58
CLCN6-202ENST00000346436 MUC3BQ9H195 1237 aa11.46□□□□□ -0.58
CLCN6-202ENST00000346436 SUDS3Q9H7L9 328 aaPredicted RBP11.46□□□□□ -0.58
CLCN6-202ENST00000346436 EPHB6O15197 1021 aa11.46□□□□□ -0.58
CLCN6-202ENST00000346436 KLHDC7AQ5VTJ3 777 aa11.46□□□□□ -0.58
CLCN6-202ENST00000346436 TRIM72Q6ZMU5 477 aa11.46□□□□□ -0.58
CLCN6-202ENST00000346436 CEP68Q76N32 757 aa11.46□□□□□ -0.58
CLCN6-202ENST00000346436 LMNTD2Q8IXW0 634 aa11.46□□□□□ -0.58
CLCN6-202ENST00000346436 ASAP3Q8TDY4 903 aa11.46□□□□□ -0.58
CLCN6-202ENST00000346436 PRMT1Q99873 361 aaKnown RBP11.46□□□□□ -0.58
CLCN6-202ENST00000346436 ZWILCHQ9H900 591 aa11.46□□□□□ -0.58
CLCN6-202ENST00000346436 FAM95CA0A1B0GW59 222 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 ZFXP17010 805 aaPredicted RBP11.45□□□□□ -0.58
CLCN6-202ENST00000346436 TAC1P20366 129 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 KCNJ1P48048 391 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 MUM1Q2TAK8 710 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 SDCCAG3Q96C92 435 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 IGFLR1Q9H665 355 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 SAYSD1Q9NPB0 183 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 TRPM5Q9NZQ8 1165 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 RAB21Q9UL25 225 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 NCKAP1Q9Y2A7 1128 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 TBX3O15119 743 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 MEFVO15553 781 aaPredicted RBP11.45□□□□□ -0.58
CLCN6-202ENST00000346436 DNAJC6O75061 913 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 EYA4O95677 639 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 FAM153BP0C7A2 387 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 MYBL2P10244 700 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 VCLP18206 1134 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 CYP11B2P19099 503 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 ANO4Q32M45 955 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 FAM153CQ494X1 144 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 PPP6R3Q5H9R7 873 aaPredicted RBP11.45□□□□□ -0.58
CLCN6-202ENST00000346436 KCNK18Q7Z418 384 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 TRIM42Q8IWZ5 723 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 KCTD17Q8N5Z5 321 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 USP13Q92995 863 aaPredicted RBP11.45□□□□□ -0.58
CLCN6-202ENST00000346436 CAPNS2Q96L46 248 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 PPP1R2P1Q96PQ5 205 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 AGPAT1Q99943 283 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 RUSC1Q9BVN2 902 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 MOV10L1Q9BXT6 1211 aaKnown RBP11.45□□□□□ -0.58
CLCN6-202ENST00000346436 FAM153AQ9UHL3 310 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 SLC25A13Q9UJS0 675 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 GPR75-ASB3A0A0A6YYF3 556 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 CKMP06732 381 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 SLC2A3P11169 496 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 SLC11A2P49281 568 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 FMO5P49326 533 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 BASP1P80723 227 aaKnown RBP11.45□□□□□ -0.58
CLCN6-202ENST00000346436 EMC2Q15006 297 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 EPC2Q52LR7 807 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
CLCN6-202ENST00000346436 ACTR5Q9H9F9 607 aaPredicted RBP11.45□□□□□ -0.58
CLCN6-202ENST00000346436 AGAP1Q9UPQ3 857 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 GLTPD2A6NH11 291 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 TBKBP1A7MCY6 615 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 SLURP2P0DP57 97 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 RMDN1Q96DB5 314 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 SPATA16Q9BXB7 569 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 KLC2Q9H0B6 622 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 PLEKHA5Q9HAU0 1116 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 KCND2Q9NZV8 630 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 ADAM22Q9P0K1 906 aa11.45□□□□□ -0.58
CLCN6-202ENST00000346436 ZC3H11AO75152 810 aaKnown RBP eCLIP11.44□□□□□ -0.581e-8■■■■■ 33.7
CLCN6-202ENST00000346436 MYO1DO94832 1006 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 ICAM1P05362 532 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 PLS3P13797 630 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 HSD17B3P37058 310 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 TAF6P49848 677 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms