RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PTK6Q13882 451 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 ZNF235Q14590 738 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 DUOXA2Q1HG44 320 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 APPL2Q8NEU8 664 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 KRT84Q9NSB2 600 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 PHKA1P46020 1223 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 SCTRP47872 440 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 PRMT9Q6P2P2 845 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 COL23A1Q86Y22 540 aaPredicted RBP20.24■□□□□ 0.83
HDAC4-201ENST00000345617 PDXKO00764 312 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 COPB2P35606 906 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 ZNF544Q6NX49 715 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 COPG2Q9UBF2 871 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 DTNAQ9Y4J8 743 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 ATP6V1B1P15313 513 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 TTKP33981 857 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 IL12RB1P42701 662 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 TAF2Q6P1X5 1199 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 SCUBE1Q8IWY4 988 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 ELOA2Q8IYF1 753 aaPredicted RBP20.24■□□□□ 0.83
HDAC4-201ENST00000345617 CNKSR1Q969H4 720 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 DCUN1D1Q96GG9 259 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 ZSWIM5Q9P217 1185 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 PAK5Q9P286 719 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 HERC5Q9UII4 1024 aaKnown RBP20.24■□□□□ 0.83
HDAC4-201ENST00000345617 INPP5FQ9Y2H2 1132 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 MICALL2Q8IY33 904 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 SEPT1Q8WYJ6 367 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 HPS3Q969F9 1004 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 MYH13Q9UKX3 1938 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 SMIM31A0A1B0GVY4 71 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 M0QYV0 167 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 UBTFL6P0CB48 400 aaPredicted RBP20.23■□□□□ 0.83
HDAC4-201ENST00000345617 C11orf88Q6PI97 169 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 ASIC4Q96FT7 647 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 SARS2Q9NP81 518 aaKnown RBP20.23■□□□□ 0.83
HDAC4-201ENST00000345617 ARHGEF38Q9NXL2 777 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 SPANXN2Q5MJ10 180 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 NFKBIL1Q9UBC1 381 aaPredicted RBP20.23■□□□□ 0.83
HDAC4-201ENST00000345617 A2ML1A8K2U0 1454 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 IL6P05231 212 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 HIST1H2AGP0C0S8 130 aaPredicted RBP20.23■□□□□ 0.83
HDAC4-201ENST00000345617 HIST1H2ADP20671 130 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 ZBTB33Q86T24 672 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 HIST1H2AHQ96KK5 128 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 HIST1H2AJQ99878 128 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 C11orf70Q9BRQ4 267 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 H2AFJQ9BTM1 129 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 LGR6Q9HBX8 967 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 AIM2O14862 343 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 DCTN2Q13561 401 aaKnown RBP20.23■□□□□ 0.83
HDAC4-201ENST00000345617 RFX8Q6ZV50 586 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 SCFD2Q8WU76 684 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 B2RBV5 119 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 KLHL41O60662 606 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 GCLMP48507 274 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 PDE4DIPQ5VU43 2346 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 CNTFP26441 200 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 COG2Q14746 738 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 APEX2Q9UBZ4 518 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 FKBP9O95302 570 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 MLH1P40692 756 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 FAM83EQ2M2I3 478 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 PADI6Q6TGC4 694 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 FKBP9P1Q75LS8 142 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 ZNF677Q86XU0 584 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 RNF135Q8IUD6 432 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 DCPSQ96C86 337 aaKnown RBP20.23■□□□□ 0.83
HDAC4-201ENST00000345617 ZBTB10Q96DT7 871 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 RXFP1Q9HBX9 757 aa20.23■□□□□ 0.83
HDAC4-201ENST00000345617 RRM2P31350 389 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 ATP2C1P98194 919 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-201ENST00000345617 TRIQKQ629K1 86 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 OMA1Q96E52 524 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 NDFIP2Q9NV92 336 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 PSTPIP1O43586 416 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 PEX3P56589 373 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 ARMC4Q5T2S8 1044 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 CACHD1Q5VU97 1274 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 ZNF786Q8N393 782 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 ILKAPQ9H0C8 392 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-201ENST00000345617 TLR7Q9NYK1 1049 aaKnown RBP20.22■□□□□ 0.83
HDAC4-201ENST00000345617 WHRNQ9P202 907 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 EFCAB6Q5THR3 1501 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 MED26O95402 600 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 A1BGP04217 495 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 MMGT1Q8N4V1 131 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 ERP44Q9BS26 406 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 AFDNP55196 1824 aaKnown RBP20.22■□□□□ 0.83
HDAC4-201ENST00000345617 YY1P25490 414 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 CDK17Q00537 523 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 C12orf60Q5U649 245 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 PIGOQ8TEQ8 1089 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 CCDC88CQ9P219 2028 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 ARIH1Q9Y4X5 557 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-201ENST00000345617 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-201ENST00000345617 TGFBR2P37173 567 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 SUPT20HL1Q3ZLR7 823 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 UGT3A1Q6NUS8 523 aa20.22■□□□□ 0.83
HDAC4-201ENST00000345617 TRIM65Q6PJ69 517 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms