RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CTXN3Q4LDR2 81 aa13.5□□□□□ -0.25
SGCA-202ENST00000344627 CYP4A22Q5TCH4 519 aa13.5□□□□□ -0.25
SGCA-202ENST00000344627 IQCEQ6IPM2 695 aa13.5□□□□□ -0.25
SGCA-202ENST00000344627 USP49Q70CQ1 688 aa13.5□□□□□ -0.25
SGCA-202ENST00000344627 CLDN23Q96B33 292 aa13.5□□□□□ -0.25
SGCA-202ENST00000344627 MSTO1Q9BUK6 570 aa13.5□□□□□ -0.25
SGCA-202ENST00000344627 PANK2Q9BZ23 570 aa13.5□□□□□ -0.25
SGCA-202ENST00000344627 CYP4F11Q9HBI6 524 aa13.5□□□□□ -0.25
SGCA-202ENST00000344627 HCFC1R1Q9NWW0 138 aa13.5□□□□□ -0.25
SGCA-202ENST00000344627 SRPRBQ9Y5M8 271 aaKnown RBP13.5□□□□□ -0.25
SGCA-202ENST00000344627 K7ELQ4 463 aaPredicted RBP13.49□□□□□ -0.25
SGCA-202ENST00000344627 MEFVO15553 781 aaPredicted RBP13.49□□□□□ -0.25
SGCA-202ENST00000344627 TBC1D4O60343 1298 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 GUCY2FP51841 1108 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 ZNF131P52739 623 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 NRLP54845 237 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 ROR1Q01973 937 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 PLD1Q13393 1074 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 SNW1Q13573 536 aaKnown RBP13.49□□□□□ -0.25
SGCA-202ENST00000344627 ZC2HC1CQ53FD0 456 aaPredicted RBP13.49□□□□□ -0.25
SGCA-202ENST00000344627 ZNF280DQ6N043 979 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 DSTYKQ6XUX3 929 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 PDZD4Q76G19 769 aaPredicted RBP13.49□□□□□ -0.25
SGCA-202ENST00000344627 SV2BQ7L1I2 683 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 USP37Q86T82 979 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 TMEM130Q8N3G9 435 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 ITFG1Q8TB96 612 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 DEPDC1BQ8WUY9 529 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 IRF7Q92985 503 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 INTS4Q96HW7 963 aaKnown RBP13.49□□□□□ -0.25
SGCA-202ENST00000344627 SUSD3Q96L08 255 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 ZFP14Q9HCL3 533 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 LTB4R2Q9NPC1 389 aa13.49□□□□□ -0.25
SGCA-202ENST00000344627 AFF4Q9UHB7 1163 aaKnown RBP13.49□□□□□ -0.25
SGCA-202ENST00000344627 FBXO2Q9UK22 296 aaPredicted RBP13.49□□□□□ -0.25
SGCA-202ENST00000344627 UBQLN1Q9UMX0 589 aaKnown RBP13.49□□□□□ -0.25
SGCA-202ENST00000344627 TTC26A0AVF1 554 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 WDR27A2RRH5 827 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 FAM170BA6NMN3 283 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 STX6O43752 255 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 CPB1P15086 417 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 CYP3A5P20815 502 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 STAT6P42226 847 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 ADCY1Q08828 1119 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 PUM1Q14671 1186 aaKnown RBP eCLIP13.48□□□□□ -0.25
SGCA-202ENST00000344627 UBXN2BQ14CS0 331 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 STK38Q15208 465 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 ENOX2Q16206 610 aaKnown RBP13.48□□□□□ -0.25
SGCA-202ENST00000344627 FOXD4L5Q5VV16 416 aaPredicted RBP13.48□□□□□ -0.25
SGCA-202ENST00000344627 ADALQ6DHV7 355 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 SFR1Q86XK3 245 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 BEST2Q8NFU1 509 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 ATRIPQ8WXE1 791 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 FOXD4L4Q8WXT5 416 aaPredicted RBP13.48□□□□□ -0.25
SGCA-202ENST00000344627 ING5Q8WYH8 240 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 DDX12PQ92771 950 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 ZNF512Q96ME7 567 aaPredicted RBP13.48□□□□□ -0.25
SGCA-202ENST00000344627 RPP25Q9BUL9 199 aaKnown RBP13.48□□□□□ -0.25
SGCA-202ENST00000344627 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
SGCA-202ENST00000344627 MRPL44Q9H9J2 332 aaKnown RBP13.48□□□□□ -0.25
SGCA-202ENST00000344627 SPATA6Q9NWH7 488 aaPredicted RBP13.48□□□□□ -0.25
SGCA-202ENST00000344627 ZSCAN32Q9NX65 697 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 TBC1D7Q9P0N9 293 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 HSFX1Q9UBD0 423 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 STK17AQ9UEE5 414 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 FBXL5Q9UKA1 691 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 PCDHB8Q9UN66 801 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 MTMR6Q9Y217 621 aa13.48□□□□□ -0.25
SGCA-202ENST00000344627 TIMM13Q9Y5L4 95 aaPredicted RBP13.48□□□□□ -0.25
SGCA-202ENST00000344627 PTPRZ1P23471 2315 aaPredicted RBP13.47□□□□□ -0.25
SGCA-202ENST00000344627 A0A0B4J269 797 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 ANKRD63C9JTQ0 380 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 FGF19O95750 216 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 PIGRP01833 764 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 HSP90AA1P07900 732 aaKnown RBP13.47□□□□□ -0.25
SGCA-202ENST00000344627 IDEP14735 1019 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 ACOT2P49753 483 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 GTF2BQ00403 316 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 YWHAHQ04917 246 aaPredicted RBP13.47□□□□□ -0.25
SGCA-202ENST00000344627 JADE1Q6IE81 842 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 CCDC73Q6ZRK6 1079 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 CD302Q8IX05 232 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 POMGNT1Q8WZA1 660 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 USP28Q96RU2 1077 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 CORO1BQ9BR76 489 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 TRMT61BQ9BVS5 477 aaKnown RBP13.47□□□□□ -0.25
SGCA-202ENST00000344627 FOXQ1Q9C009 403 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 TRPV4Q9HBA0 871 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 AGO2Q9UKV8 859 aaKnown RBP13.47□□□□□ -0.25
SGCA-202ENST00000344627 NOTCH4Q99466 2003 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 MYH15Q9Y2K3 1946 aa13.47□□□□□ -0.25
SGCA-202ENST00000344627 ANK1P16157 1881 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 MYMKA6NI61 221 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 TISP43B9A030 160 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 OAZ2O95190 189 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 SEC24AO95486 1093 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 LRPAP1P30533 357 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 EPHA5P54756 1037 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 POU5F1Q01860 360 aaKnown RBP13.46□□□□□ -0.25
SGCA-202ENST00000344627 TMEM132DQ14C87 1099 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms